RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 CYP2B6P20813 491 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 HOXD10P28358 340 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 AMPD3Q01432 767 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 SP2Q02086 613 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 ARHGEF6Q15052 776 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 TAPT1Q6NXT6 567 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 METTL7BQ6UX53 244 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 TRMT44Q8IYL2 757 aaKnown RBP11.92□□□□□ -0.5
LEMD3-202ENST00000539442 LARP4BQ92615 738 aaKnown RBP11.92□□□□□ -0.5
LEMD3-202ENST00000539442 RAD54LQ92698 747 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 PAGE5Q96GU1 130 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 BLOC1S4Q9NUP1 217 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 KBTBD4Q9NVX7 518 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 NRBP1Q9UHY1 535 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 KIAA1024Q9UPX6 916 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 PCDHA10Q9Y5I2 948 aa11.92□□□□□ -0.5
LEMD3-202ENST00000539442 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
LEMD3-202ENST00000539442 SLITRK3O94933 977 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ARIH2O95376 493 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 GGPS1O95749 300 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 PSAPP07602 524 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 TXNP10599 105 aaKnown RBP11.91□□□□□ -0.5
LEMD3-202ENST00000539442 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ACTR2P61160 394 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
LEMD3-202ENST00000539442 CYP4A11Q02928 519 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ACVR2BQ13705 512 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ECM1Q16610 540 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 CELF3Q5SZQ8 465 aaKnown RBP11.91□□□□□ -0.5
LEMD3-202ENST00000539442 MIS18BP1Q6P0N0 1132 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 SV2BQ7L1I2 683 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 LRRC15Q8TF66 581 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 DYDC2Q96IM9 177 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 PLIN2Q99541 437 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 LXNQ9BS40 222 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 MLXIPQ9HAP2 919 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 RGL1Q9NZL6 768 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 KIAA1217Q5T5P2 1943 aa11.91□□□□□ -0.5
LEMD3-202ENST00000539442 MGAMO43451 1857 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 FKTNO75072 461 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 ECM2O94769 699 aaPredicted RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SMC2O95347 1197 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 ATG7O95352 703 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SUPT20HL2P0C7V6 817 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 AFMP43652 599 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 FLT3LGP49771 235 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 PSMC5P62195 406 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 CTTNQ14247 550 aaKnown RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 LY6KQ17RY6 165 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 ABHD15Q6UXT9 468 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 KCNK18Q7Z418 384 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 TPH2Q8IWU9 490 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 DHX37Q8IY37 1157 aaKnown RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 C4orf19Q8IY42 314 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SPATA20Q8TB22 786 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 NACC1Q96RE7 527 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 MTRQ99707 1265 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 FLRT1Q9NZU1 646 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
LEMD3-202ENST00000539442 ZHX1Q9UKY1 873 aaPredicted RBP11.9□□□□□ -0.5
LEMD3-202ENST00000539442 IGSF9BQ9UPX0 1349 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 IGKV6D-21A0A0A0MT36 114 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 E9PMD0 336 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 FOXN1O15353 648 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 EYA4O95677 639 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 GH1P01241 217 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 PLA2G4BP0C869 781 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
LEMD3-202ENST00000539442 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
LEMD3-202ENST00000539442 PRMT2P55345 433 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 PRKCZQ05513 592 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 DPYDQ12882 1025 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 PNOCQ13519 176 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 LAMC2Q13753 1193 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 MCM6Q14566 821 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 CCL14Q16627 93 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 DUSP28Q4G0W2 176 aa11.89□□□□□ -0.51
LEMD3-202ENST00000539442 MFSD14CQ5VZR4 134 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms