RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 GANQ9H2C0 597 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 FAM153AQ9UHL3 310 aa13.16□□□□□ -0.3
CPNE8-203ENST00000538596 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 PTK2Q05397 1052 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 KCNA1Q09470 495 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 GIT2Q14161 759 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
CPNE8-203ENST00000538596 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 ARL8AQ96BM9 186 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 IVLP07476 585 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 SPATA31C1P0DKV0 1188 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 POLD1P28340 1107 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
CPNE8-203ENST00000538596 CRKP46108 304 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
CPNE8-203ENST00000538596 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
CPNE8-203ENST00000538596 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 SFI1A8K8P3 1242 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 G3V3G9 751 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CETN3O15182 167 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 USP11P51784 963 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 RBM5P52756 815 aaKnown RBP eCLIP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 MARSP56192 900 aaKnown RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 GUCY2DQ02846 1103 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 ASIC2Q16515 512 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CERKLQ49MI3 558 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 FAM76AQ8TAV0 307 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 KRT12Q99456 494 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 EPB41L5Q9HCM4 733 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 FRMD3A2A2Y4 597 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 GNA14O95837 355 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CASP4P49662 377 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 IKQ13123 557 aaPredicted RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 DPY19L2P1Q6NXN4 242 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 LENG9Q96B70 501 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CYP3A7-CYP3A51PA0A087WV96 503 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CLIC2O15247 247 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 AKAP3O75969 853 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 CYP3A7P24462 503 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 EPHB4P54760 987 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 TTMPQ5BVD1 217 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 MEI1Q5TIA1 1274 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 IRF2BP2Q7Z5L9 587 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 NUCKS1Q9H1E3 243 aaKnown RBP13.14□□□□□ -0.31
CPNE8-203ENST00000538596 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
CPNE8-203ENST00000538596 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
CPNE8-203ENST00000538596 KRT14P02533 472 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 JAG1P78504 1218 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 TCERG1LQ5VWI1 586 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 KCTD16Q68DU8 428 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 UCHL3P15374 230 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
CPNE8-203ENST00000538596 HHIPL2Q6UWX4 724 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
CPNE8-203ENST00000538596 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 MBOAT7Q96N66 472 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 RUSC1Q9BVN2 902 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 ARMCX3Q9UH62 379 aaPredicted RBP13.13□□□□□ -0.31
CPNE8-203ENST00000538596 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
CPNE8-203ENST00000538596 F5H6K3 240 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 ZBTB39O15060 712 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 PON1P27169 355 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 ICA1Q05084 483 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 KLRC3Q07444 240 aa13.12□□□□□ -0.31
CPNE8-203ENST00000538596 EDRF1Q3B7T1 1238 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms