RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SREBF1P36956 1147 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 SLC26A2P50443 739 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 KCNQ1P51787 676 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 EXOSC10Q01780 885 aaKnown RBP9.88□□□□□ -0.83
DDB1-212ENST00000538470 TFF2Q03403 129 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 FUT2Q10981 343 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
DDB1-212ENST00000538470 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 MXRA8Q9BRK3 442 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 KCNH7Q9NS40 1196 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 SLC9A2Q9UBY0 812 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 MTUS1Q9ULD2 1270 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 RWDD3Q9Y3V2 267 aa9.88□□□□□ -0.83
DDB1-212ENST00000538470 ADGRA3Q8IWK6 1321 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 EVPLQ92817 2033 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 KLF18A0A0U1RQI7 1052 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 ESYT2A0FGR8 921 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 STXBP3O00186 592 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 CHRNA1P02708 482 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 NEFLP07196 543 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 MARK3P27448 753 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 CLK2P49760 499 aaKnown RBP9.87□□□□□ -0.83
DDB1-212ENST00000538470 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 TSHZ1Q6ZSZ6 1077 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 PLPPR4Q7Z2D5 763 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 CCDC12Q8WUD4 166 aaPredicted RBP9.87□□□□□ -0.83
DDB1-212ENST00000538470 MRPL38Q96DV4 380 aaKnown RBP9.87□□□□□ -0.83
DDB1-212ENST00000538470 C17orf80Q9BSJ5 609 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 PKD2L1Q9P0L9 805 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 BRPF3Q9ULD4 1205 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 SQORQ9Y6N5 450 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 COL1A2P08123 1366 aa9.87□□□□□ -0.83
DDB1-212ENST00000538470 SMCO2A6NFE2 343 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 H3BNC9 293 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 M0QZ92 97 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 GHRP10912 638 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.833e-7■■□□□ 14
DDB1-212ENST00000538470 ACTR2P61160 394 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 MRPS6P82932 125 aaKnown RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 FGD1P98174 961 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 SETQ01105 290 aaPredicted RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 LPIN1Q14693 890 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 PFKFB3Q16875 520 aaPredicted RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 ADCK5Q3MIX3 580 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 EPC2Q52LR7 807 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 FBXO47Q5MNV8 452 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 MARCH8Q5T0T0 291 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 IER5Q5VY09 327 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 RASEFQ8IZ41 740 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 FBXL16Q8N461 479 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 DNAJB3Q8WWF6 145 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 KCNB2Q92953 911 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 TCEANC2Q96MN5 208 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 PCYT2Q99447 389 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 FTHL17Q9BXU8 183 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 UBE2ZQ9H832 354 aaPredicted RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 RC3H2Q9HBD1 1191 aaKnown RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 CDY2AQ9Y6F7 541 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
DDB1-212ENST00000538470 MYO7AQ13402 2215 aa9.86□□□□□ -0.83
DDB1-212ENST00000538470 KDM3AQ9Y4C1 1321 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
DDB1-212ENST00000538470 IGKV6D-21A0A0A0MT36 114 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.85□□□□□ -0.83
DDB1-212ENST00000538470 C5orf67F2Z3F1 127 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 MEIS1O00470 390 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 UPP2O95045 317 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 ATG7O95352 703 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 RB1P06400 928 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 CYP3A4P08684 503 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 SCG2P13521 617 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 INSRRP14616 1297 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 CDC27P30260 824 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 STAT5BP51692 787 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 ITGB3BPQ13352 177 aaPredicted RBP9.85□□□□□ -0.83
DDB1-212ENST00000538470 PLCB4Q15147 1175 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 FAM160B1Q5W0V3 765 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 TMEM192Q8IY95 271 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 FIBCD1Q8N539 461 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 IL17RAQ96F46 866 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 PGBD1Q96JS3 809 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 C11orf84Q9BUA3 381 aaPredicted RBP9.85□□□□□ -0.83
DDB1-212ENST00000538470 C1QTNF1Q9BXJ1 281 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 LMAN2LQ9H0V9 348 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
DDB1-212ENST00000538470 TCEAL9Q9UHQ7 104 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 PCDHA2Q9Y5H9 948 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 TRPV2Q9Y5S1 764 aa9.85□□□□□ -0.83
DDB1-212ENST00000538470 IGSF9BQ9UPX0 1349 aa9.84□□□□□ -0.83
DDB1-212ENST00000538470 SMIM35A0A1B0GVV1 85 aa9.84□□□□□ -0.83
DDB1-212ENST00000538470 POTEB3A0JP26 581 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms