RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 MEIS3P2A8K0S8 358 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 B2RBV5 119 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 C9IYK1 514 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 FZD9O00144 591 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RGS13O14921 159 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SMAD7O15105 426 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ADAMTS4O75173 837 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 BBOX1O75936 387 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ATE1O95260 518 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 WNT11O96014 354 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CD8BP10966 210 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TRIM27P14373 513 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SPINK2P20155 84 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GUCY2CP25092 1073 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RFX5P48382 616 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CLCN7P51798 805 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RPS8P62241 208 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ST5P78524 1137 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZP2Q05996 745 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GRAPQ13588 217 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GNPTABQ3T906 1256 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HSP90AB4PQ58FF6 505 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HSP90AB3PQ58FF7 597 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ARTNQ5T4W7 220 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 NBPF12Q5TAG4 269 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 C20orf194Q5TEA3 1177 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SLC4A10Q6U841 1118 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DLK2Q6UY11 383 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TMC3Q7Z5M5 1100 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TMEM192Q8IY95 271 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 FAM169BQ8N8A8 192 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 LINS1Q8NG48 757 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GRAPLQ8TC17 118 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 BCL7CQ8WUZ0 217 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RNF141Q8WVD5 230 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 HNRNPLLQ8WVV9 542 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RBM17Q96I25 401 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SHDQ96IW2 340 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 Q96M66 194 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SRPK1Q96SB4 655 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 MEIS3Q99687 375 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 TM9SF2Q99805 663 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DSCC1Q9BVC3 393 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PLA2G12BQ9BX93 195 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ASPNQ9BXN1 380 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 STK31Q9BXU1 1019 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RTFDC1Q9BY42 306 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 NYXQ9GZU5 481 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 CARS2Q9HA77 564 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PCDH12Q9NPG4 1184 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GPATCH2Q9NW75 528 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 GFOD1Q9NXC2 390 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 RNF181Q9P0P0 153 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SLAMF8Q9P0V8 285 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SUGT1Q9Y2Z0 365 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ATP6V0A2Q9Y487 856 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 DNAH12Q6ZR08 3092 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SCN7AQ01118 1682 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZBED9Q6R2W3 1325 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 PITPNM2Q9BZ72 1349 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 ZNF541Q9H0D2 1346 aa3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 COL11A2P13942 1736 aaPredicted RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 BRCA1P38398 1863 aaKnown RBP3.16□□□□□ -1.9
TNFRSF1A-210ENST00000537842 BCORQ6W2J9 1755 aa3.15□□□□□ -1.9
TNFRSF1A-210ENST00000537842 IBTKQ9P2D0 1353 aaPredicted RBP3.15□□□□□ -1.9
TNFRSF1A-210ENST00000537842 A0A0C4DFX4 3053 aa3.15□□□□□ -1.9
TNFRSF1A-210ENST00000537842 SSU72P8A0A1W2PR75 194 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 KIAA1324LA8MWY0 1029 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GRM8O00222 908 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IGF2BP3O00425 579 aaKnown RBP eCLIP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ENPP3O14638 875 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PDE8AO60658 829 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TAF5LO75529 589 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 DDNO94850 711 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PRAMEF1O95521 474 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 HSP90AA1P07900 732 aaKnown RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ZNF865P0CJ78 1059 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TPP2P29144 1249 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ALDH1B1P30837 517 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 KIR3DL1P43629 444 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GIPRP48546 466 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 GP2P55259 537 aaKnown RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CTSWP56202 376 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 SETQ01105 290 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 EGR3Q06889 387 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CXCL9Q07325 125 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 IFRD2Q12894 506 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 NMIQ13287 307 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 HDAC1Q13547 482 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 RASA3Q14644 834 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 PPP2R5DQ14738 602 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TCEAL1Q15170 157 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 NBPF9Q3BBW0 867 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 ALDH1L2Q3SY69 923 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 RABL6Q3YEC7 729 aaPredicted RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 LRRC24Q50LG9 513 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 TNNI3KQ59H18 835 aa3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 NOL9Q5SY16 702 aaKnown RBP3.15□□□□□ -1.91
TNFRSF1A-210ENST00000537842 CDCP2Q5VXM1 449 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms