RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CDHR1Q96JP9 859 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-209ENST00000537178 FRMD3A2A2Y4 597 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 TMEM247A6NEH6 219 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 ZBBXA8MT70 800 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 ADCY1Q08828 1119 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 EAPPQ56P03 285 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-209ENST00000537178 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 TRIML2Q8N7C3 387 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 FLAD1Q8NFF5 587 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
CLIP1-209ENST00000537178 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
CLIP1-209ENST00000537178 TRIM15Q9C019 465 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 SUN2Q9UH99 717 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 TEKT2Q9UIF3 430 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 PHLPP2Q6ZVD8 1323 aa11.47□□□□□ -0.57
CLIP1-209ENST00000537178 SEMA3EO15041 775 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 GUCY2CP25092 1073 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 BTDP43251 543 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 GYG1P46976 350 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 EPHB1P54762 984 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 ALS2CLQ60I27 953 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 TRMT10CQ7L0Y3 403 aaKnown RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 PIP4K2CQ8TBX8 421 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 KMT5AQ9NQR1 393 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 ABCC12Q96J65 1359 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 WDR64B1ANS9 1081 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 CA4P22748 312 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 ARHGEF6Q15052 776 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 BZW1Q7L1Q6 419 aaKnown RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 RNF217Q8TC41 542 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 ABTB1Q969K4 478 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 EXOC4Q96A65 974 aa11.46□□□□□ -0.57
CLIP1-209ENST00000537178 ADD3Q9UEY8 706 aaKnown RBP11.46□□□□□ -0.57
CLIP1-209ENST00000537178 IQANK1A0A1B0GTG1 560 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 PRPSAP2O60256 369 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 ZBED6P86452 979 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 BBS9Q3SYG4 887 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 KIAA0825Q8IV33 1275 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 SULF1Q8IWU6 871 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 ST13P4Q8IZP2 240 aaPredicted RBP11.46□□□□□ -0.58
CLIP1-209ENST00000537178 EEF2KMTQ96G04 330 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 ZBTB18Q99592 522 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 SLC8A2Q9UPR5 921 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 ATP8B3O60423 1300 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 CFLARO15519 480 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 POLE2P56282 527 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 NNTQ13423 1086 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 TRAIPQ9BWF2 469 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 ANLNQ9NQW6 1124 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 FIS1Q9Y3D6 152 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 CLIC4Q9Y696 253 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 DIP2AQ14689 1571 aa11.46□□□□□ -0.58
CLIP1-209ENST00000537178 hCG_1984214I3L0E3 225 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 NCF2P19878 526 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 GRAMD1BQ3KR37 738 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 ZNF713Q8N859 430 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SUFUQ9UMX1 484 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 AKT3Q9Y243 479 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 WDR17Q8IZU2 1322 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SORBS3O60504 671 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 PMLP29590 882 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 ARMCX2Q7L311 632 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 GDAP1Q8TB36 358 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 FMO2Q99518 471 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 MAPK13O15264 365 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 ADCY9O60503 1353 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 LRRN2O75325 713 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 KRT37O76014 449 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 NPR1P16066 1061 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 MXI1P50539 228 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 TFAMQ00059 246 aaKnown RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SURF1Q15526 300 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 FAM133BQ5BKY9 247 aaKnown RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 C6orf118Q5T5N4 469 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 KIAA1841Q6NSI8 718 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 CENPUQ71F23 418 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 KCTD6Q8NC69 237 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 DONSONQ9NYP3 566 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 PCDHA4Q9UN74 947 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SLFN14P0C7P3 912 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SEPT2Q15019 361 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 LRRC23Q53EV4 343 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 DPP9Q86TI2 863 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLIP1-209ENST00000537178 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 AP5M1Q9H0R1 490 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 KIF9Q9HAQ2 790 aa11.45□□□□□ -0.58
CLIP1-209ENST00000537178 OLA1Q9NTK5 396 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms