RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 M0R2N6 131 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 IGHA2P01877 340 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 TFRCP02786 760 aaKnown RBP8.3□□□□□ -1.08
YBX3-206ENST00000536823 FGRP09769 529 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 GSPT1P15170 499 aaKnown RBP8.3□□□□□ -1.08
YBX3-206ENST00000536823 GRIK1P39086 918 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 SEC13P55735 322 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 CCINQ13939 588 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 MFSD14CQ5VZR4 134 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 OLFML2BQ68BL8 750 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 RIOX2Q8IUF8 465 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 NPLOC4Q8TAT6 608 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 CLP1Q92989 425 aaKnown RBP8.3□□□□□ -1.08
YBX3-206ENST00000536823 TEX13BQ9BXU2 312 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 FLRT1Q9NZU1 646 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
YBX3-206ENST00000536823 ZNFX1Q9P2E3 1918 aaKnown RBP8.3□□□□□ -1.08
YBX3-206ENST00000536823 RANBP6O60518 1105 aaKnown RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 PCP11498 1178 aaKnown RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 FCER1AP12319 257 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 BMP3P12645 472 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 STAT3P40763 770 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 NOVP48745 357 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 HAND2P61296 217 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 AKNAD1Q5T1N1 836 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 TTC22Q5TAA0 569 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 CWC27Q6UX04 472 aaKnown RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 DPP9Q86TI2 863 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 TBC1D10CQ8IV04 446 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 PRPF38AQ8NAV1 312 aaKnown RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 DIS3LQ8TF46 1054 aaKnown RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 HTATIP2Q9BUP3 242 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
YBX3-206ENST00000536823 SLC38A10Q9HBR0 1119 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 INCENPQ9NQS7 918 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 SLC5A4Q9NY91 659 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 FEM1BQ9UK73 627 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 OGDHLQ9ULD0 1010 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 ALPK3Q96L96 1907 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 RAD50Q92878 1312 aa8.29□□□□□ -1.08
YBX3-206ENST00000536823 PLXNA1Q9UIW2 1896 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 ATP2A1O14983 1001 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 NMT2O60551 498 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 PLA2G6O60733 806 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 ZBED4O75132 1171 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 CYBAP13498 195 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 CCND3P30281 292 aaPredicted RBP8.28□□□□□ -1.08
YBX3-206ENST00000536823 CYP2C19P33261 490 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 SLC1A4P43007 532 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 STAT2P52630 851 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
YBX3-206ENST00000536823 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
YBX3-206ENST00000536823 FAM160B2Q86V87 743 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 ZDHHC13Q8IUH4 622 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 TRPV1Q8NER1 839 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 CHURC1Q8WUH1 139 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 MMP19Q99542 508 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 DSCC1Q9BVC3 393 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 RNF41Q9H4P4 317 aaPredicted RBP8.28□□□□□ -1.08
YBX3-206ENST00000536823 IL17RBQ9NRM6 502 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 TOMM22Q9NS69 142 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 TCP11L1Q9NUJ3 509 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 ISY1Q9ULR0 285 aaKnown RBP8.28□□□□□ -1.08
YBX3-206ENST00000536823 NEDD4P46934 1319 aa8.28□□□□□ -1.08
YBX3-206ENST00000536823 TMEM232C9JQI7 657 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 MSCO60682 206 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 WNT11O96014 354 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 TOP1P11387 765 aaKnown RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 GLB1P16278 677 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 MCCP23508 829 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 NT5C2P49902 561 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 OAZ1P54368 228 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 KCNA1Q09470 495 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 IKQ13123 557 aaPredicted RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 KCTD2Q14681 263 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 HIF1AQ16665 826 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 Q6ZS46 218 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 RASGRP2Q7LDG7 609 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 NECAB2Q7Z6G3 386 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 DCAF4Q8WV16 495 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 TTC9Q92623 222 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 PAWRQ96IZ0 340 aaKnown RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 IL25Q9H293 177 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 DDX20Q9UHI6 824 aaKnown RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 ADGRE2Q9UHX3 823 aa8.27□□□□□ -1.09
YBX3-206ENST00000536823 RBM19Q9Y4C8 960 aaKnown RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 CTDP1Q9Y5B0 961 aaPredicted RBP8.27□□□□□ -1.09
YBX3-206ENST00000536823 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms