RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CC2D1AQ6P1N0 951 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-208ENST00000536710 PGM2L1Q6PCE3 622 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 ZZZ3Q8IYH5 903 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 ZNF610Q8N9Z0 462 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 ARRDC4Q8NCT1 418 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 CLEC4DQ8WXI8 215 aa7.19□□□□□ -1.26
PRKDC-208ENST00000536710 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-208ENST00000536710 TOPORSQ9NS56 1045 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-208ENST00000536710 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 K7ESF4 209 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 FOXP2O15409 715 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 AKAP10O43572 662 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 CT47B1P0C2W7 299 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 PDE6BP35913 854 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 PHC1P78364 1004 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 PIN1Q13526 163 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 LRRC41Q15345 812 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 PNMA8AQ86V59 439 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 RTF1Q92541 710 aaKnown RBP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 FUBP3Q96I24 572 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 KIRREL1Q96J84 757 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 ZMAT4Q9H898 229 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 MKS1Q9NXB0 559 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 FAN1Q9Y2M0 1017 aa7.18□□□□□ -1.26
PRKDC-208ENST00000536710 YBX2Q9Y2T7 364 aaKnown RBP7.18□□□□□ -1.26
PRKDC-208ENST00000536710 TSPAN6O43657 245 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 SNUPNO95149 360 aaKnown RBP7.17□□□□□ -1.26
PRKDC-208ENST00000536710 ZBTB7AO95365 584 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 SCGB1D2O95969 90 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 C4BPAP04003 597 aaKnown RBP7.17□□□□□ -1.26
PRKDC-208ENST00000536710 PRR5P85299 388 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 NR1I3Q14994 352 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 CLUL1Q15846 466 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 GPR158Q5T848 1215 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 ESRP1Q6NXG1 681 aaKnown RBP7.17□□□□□ -1.26
PRKDC-208ENST00000536710 FRMD7Q6ZUT3 714 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 CMIPQ8IY22 773 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 AMOTL1Q8IY63 956 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 CHPFQ8IZ52 775 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 CBARPQ8N350 705 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-208ENST00000536710 HIPK4Q8NE63 616 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 ZDHHC5Q9C0B5 715 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 MSRAQ9UJ68 235 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 ZNF180Q9UJW8 692 aa7.17□□□□□ -1.26
PRKDC-208ENST00000536710 E2F8A0AVK6 867 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 CFBP00751 764 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 MMEP08473 750 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 TMEM253P0C7T8 217 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 ERVFRD-1P60508 538 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 LRRC32Q14392 662 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 PAN2Q504Q3 1202 aaKnown RBP7.16□□□□□ -1.26
PRKDC-208ENST00000536710 ZMYM1Q5SVZ6 1142 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 CATSPEREQ5SY80 951 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 RPTNQ6XPR3 784 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 INTS4Q96HW7 963 aaKnown RBP7.16□□□□□ -1.26
PRKDC-208ENST00000536710 GBP4Q96PP9 640 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 BCAS3Q9H6U6 928 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 LUC7LQ9NQ29 371 aaKnown RBP7.16□□□□□ -1.26
PRKDC-208ENST00000536710 IP6K2Q9UHH9 426 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 KCNG1Q9UIX4 513 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 LUC7L2Q9Y383 392 aaKnown RBP7.16□□□□□ -1.26
PRKDC-208ENST00000536710 HCFC2Q9Y5Z7 792 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
PRKDC-208ENST00000536710 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-208ENST00000536710 XPOTO43592 962 aaKnown RBP7.15□□□□□ -1.26
PRKDC-208ENST00000536710 SDHAP31040 664 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 FNTBP49356 437 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 SLC9A5Q14940 896 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 PCBP2Q15366 365 aaKnown RBP eCLIP7.15□□□□□ -1.26
PRKDC-208ENST00000536710 EPHA7Q15375 998 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 FYB2Q5VWT5 728 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 NME9Q86XW9 330 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 ABI1Q8IZP0 508 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 C7orf31Q8N865 590 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 C1orf162Q8NEQ5 155 aaPredicted RBP7.15□□□□□ -1.26
PRKDC-208ENST00000536710 TGFBRAP1Q8WUH2 860 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 FAXDC2Q96IV6 333 aa7.15□□□□□ -1.26
PRKDC-208ENST00000536710 NOB1Q9ULX3 412 aaKnown RBP7.15□□□□□ -1.26
PRKDC-208ENST00000536710 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 OR14I1A6ND48 311 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 RASSF10A6NK89 507 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ACOT7O00154 380 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 APOL3O95236 402 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 FAHP16930 419 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ZSCAN20P17040 1043 aaPredicted RBP7.14□□□□□ -1.27
PRKDC-208ENST00000536710 TMEM62Q0P6H9 643 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 LRP8Q14114 963 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ACAP2Q15057 778 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 PDCD1Q15116 288 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 INAVAQ3KP66 663 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ZC3H14Q6PJT7 736 aaKnown RBP7.14□□□□□ -1.27
PRKDC-208ENST00000536710 TTLL7Q6ZT98 887 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 FLAD1Q8NFF5 587 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ASB15Q8WXK1 588 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ALG3Q92685 438 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 DDX11Q96FC9 970 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 C16orf92Q96LL3 132 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 CDH19Q9H159 772 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 SLC6A17Q9H1V8 727 aa7.14□□□□□ -1.27
PRKDC-208ENST00000536710 ARHGAP28Q9P2N2 729 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms