RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ORC3Q9UBD5 711 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-206ENST00000536398 YBX2Q9Y2T7 364 aaKnown RBP16.21■□□□□ 0.19
UBE3B-206ENST00000536398 EMSYQ7Z589 1322 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 NRCAMQ92823 1304 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 STK36Q9NRP7 1315 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 IGKV6D-21A0A0A0MT36 114 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 RSPH10B2B2RC85 870 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 JAK2O60674 1132 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 CTSHP09668 335 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 RSPH10BP0C881 870 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 GNAT1P11488 350 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 INSRRP14616 1297 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 STAT5BP51692 787 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 USP11P51784 963 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 PLCB4Q15147 1175 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 TMCO2Q7Z6W1 182 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-206ENST00000536398 OXER1Q8TDS5 423 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 TRAPPC12Q8WVT3 735 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 CDX2Q99626 313 aaPredicted RBP16.2■□□□□ 0.18
UBE3B-206ENST00000536398 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
UBE3B-206ENST00000536398 TANC1Q9C0D5 1861 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 MSH4O15457 936 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 TDP2O95551 362 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 ACTN1P12814 892 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 ATP2A2P16615 1042 aaKnown RBP16.19■□□□□ 0.18
UBE3B-206ENST00000536398 SETQ01105 290 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-206ENST00000536398 GRIN2CQ14957 1233 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 SWSAP1Q6NVH7 229 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 PLPPR4Q7Z2D5 763 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 CCDC60Q8IWA6 550 aaPredicted RBP16.19■□□□□ 0.18
UBE3B-206ENST00000536398 NSUN7Q8NE18 718 aaKnown RBP16.19■□□□□ 0.18
UBE3B-206ENST00000536398 NKX2-4Q9H2Z4 354 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 TRPC6Q9Y210 931 aa16.19■□□□□ 0.18
UBE3B-206ENST00000536398 MBLAC1A4D2B0 266 aaPredicted RBP16.18■□□□□ 0.18
UBE3B-206ENST00000536398 BACH1O14867 736 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 ATP4AP20648 1035 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 FOSBP53539 338 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 INF2Q27J81 1249 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 EARS2Q5JPH6 523 aaKnown RBP16.18■□□□□ 0.18
UBE3B-206ENST00000536398 GALNT17Q6IS24 598 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 CNKSR3Q6P9H4 555 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 MYLIPQ8WY64 445 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 C22orf23Q9BZE7 217 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 TBC1D22BQ9NU19 505 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 EYSQ5T1H1 3165 aa16.18■□□□□ 0.18
UBE3B-206ENST00000536398 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 POTEB3A0JP26 581 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 PARNO95453 639 aaKnown RBP16.17■□□□□ 0.18
UBE3B-206ENST00000536398 CHRNA1P02708 482 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 CYP3A7P24462 503 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 WDR5P61964 334 aaKnown RBP16.17■□□□□ 0.18
UBE3B-206ENST00000536398 DEFB103AP81534 67 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBE3B-206ENST00000536398 RAB30Q15771 203 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 POTEBQ6S5H4 581 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 TRMT1LQ7Z2T5 733 aaKnown RBP16.17■□□□□ 0.18
UBE3B-206ENST00000536398 FAM177A1Q8N128 213 aaPredicted RBP16.17■□□□□ 0.18
UBE3B-206ENST00000536398 DBF4BQ8NFT6 615 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 DNAJB3Q8WWF6 145 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 MSRAQ9UJ68 235 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 TUBE1Q9UJT0 475 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
UBE3B-206ENST00000536398 FAM205CA6NFA0 338 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 ARHGEF15O94989 841 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 Q4G0T1 1027 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 FAM26DQ5JW98 314 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 ZNF746Q6NUN9 644 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-206ENST00000536398 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBE3B-206ENST00000536398 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 SLC5A5Q92911 643 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 MBOAT7Q96N66 472 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 FAM49AQ9H0Q0 323 aaPredicted RBP16.16■□□□□ 0.18
UBE3B-206ENST00000536398 UNC45AQ9H3U1 944 aa16.16■□□□□ 0.18
UBE3B-206ENST00000536398 TMEM265A0A087WTH1 108 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 RRN3P2A6NIE6 340 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 CHMP2AO43633 222 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 SLC37A4O43826 429 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 BAIAP3O94812 1187 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 XBP1P17861 261 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 RBM25P49756 843 aaKnown RBP16.15■□□□□ 0.18
UBE3B-206ENST00000536398 KRT76Q01546 638 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 MGAT3Q09327 533 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 NR5A1Q13285 461 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 PLEKHG4Q58EX7 1191 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 FAM160B1Q5W0V3 765 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 HERC6Q8IVU3 1022 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 WASF1Q92558 559 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 GABBR1Q9UBS5 961 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 PCDHA11Q9Y5I1 949 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 PCDHA10Q9Y5I2 948 aa16.15■□□□□ 0.18
UBE3B-206ENST00000536398 MAFBQ9Y5Q3 323 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms