RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 TUBE1Q9UJT0 475 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 TRPC6Q9Y210 931 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 CYP46A1Q9Y6A2 500 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 CHD7Q9P2D1 2997 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 ESYT2A0FGR8 921 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 FAM86B1E9PN63 330 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 FAM86B2P0C5J1 330 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 GNA11P29992 359 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 TAF2Q6P1X5 1199 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 RASGRP4Q8TDF6 673 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 RAD9AQ99638 391 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 RNF26Q9BY78 433 aaPredicted RBP16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 MTUS1Q9ULD2 1270 aa16.27■□□□□ 0.2
RTN3P1-201ENST00000536295 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 CHRNA1P02708 482 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 GHRP10912 638 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 INSRRP14616 1297 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 IFNAR1P17181 557 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 STAT5BP51692 787 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 STK3Q13188 491 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 PLCB4Q15147 1175 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 FAM26DQ5JW98 314 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 MARCH8Q5T0T0 291 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 KRT40Q6A162 431 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 NIPA1Q7RTP0 329 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 RSPH3Q86UC2 560 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 DNAJB3Q8WWF6 145 aa16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 FAM49AQ9H0Q0 323 aaPredicted RBP16.26■□□□□ 0.19
RTN3P1-201ENST00000536295 MBLAC1A4D2B0 266 aaPredicted RBP16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 BACH1O14867 736 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 UPP2O95045 317 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 CCNE2O96020 404 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 CYP3A4P08684 503 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 EVCP57679 992 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 MCTP2Q6DN12 878 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 BICD2Q8TD16 824 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 TRAPPC12Q8WVT3 735 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 THEGQ9P2T0 379 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 MTCH2Q9Y6C9 303 aa16.25■□□□□ 0.19
RTN3P1-201ENST00000536295 KAT6AQ92794 2004 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 LINC01553A4QN01 128 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 RRN3P2A6NIE6 340 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 IPO5O00410 1097 aaKnown RBP16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 CPLX1O14810 134 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 NLRP5P59047 1200 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 GRB10Q13322 594 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 SKIV2LQ15477 1246 aaKnown RBP16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 PRR16Q569H4 304 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 PLPPR4Q7Z2D5 763 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 RPAINQ86UA6 219 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 TRIM22Q8IYM9 498 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 GDPD5Q8WTR4 605 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 CRYGNQ8WXF5 182 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 APBB2Q92870 758 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 TM6SF1Q9BZW5 370 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 INSL6Q9Y581 213 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 CDY2AQ9Y6F7 541 aa16.24■□□□□ 0.19
RTN3P1-201ENST00000536295 MICAL3Q7RTP6 2002 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 POTEB3A0JP26 581 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 DHX15O43143 795 aaKnown RBP16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 ATG7O95352 703 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 MGAT3Q09327 533 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 TMEM62Q0P6H9 643 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 LPIN1Q14693 890 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 POTEBQ6S5H4 581 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 ABHD15Q6UXT9 468 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 TGS1Q96RS0 853 aaKnown RBP16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 YME1L1Q96TA2 773 aa16.23■□□□□ 0.19
RTN3P1-201ENST00000536295 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 TJAP1Q5JTD0 557 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 SWSAP1Q6NVH7 229 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 PDXDC2PQ6P474 469 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 TRMT1LQ7Z2T5 733 aaKnown RBP16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 CCDC60Q8IWA6 550 aaPredicted RBP16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 TOP1MTQ969P6 601 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 TSPYL2Q9H2G4 693 aaPredicted RBP16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 ZNF302Q9NR11 478 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 TCEAL9Q9UHQ7 104 aa16.22■□□□□ 0.19
RTN3P1-201ENST00000536295 IGKV6D-21A0A0A0MT36 114 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 M0QZ92 97 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 LPXNO60711 386 aa16.21■□□□□ 0.19
RTN3P1-201ENST00000536295 POU3F3P20264 500 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms