RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 PCDHA1Q9Y5I3 950 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 CETN3O15182 167 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
CHPF-203ENST00000535926 ZFPM1Q8IX07 1006 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 RUFY1Q96T51 708 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 HDAC9Q9UKV0 1011 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 EPS15P42566 896 aa20.52■□□□□ 0.88
CHPF-203ENST00000535926 SPIRE1Q08AE8 756 aa20.52■□□□□ 0.88
CHPF-203ENST00000535926 NFIAQ12857 509 aa20.52■□□□□ 0.88
CHPF-203ENST00000535926 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.88
CHPF-203ENST00000535926 EDRF1Q3B7T1 1238 aa20.52■□□□□ 0.88
CHPF-203ENST00000535926 ANO3Q9BYT9 981 aa20.52■□□□□ 0.88
CHPF-203ENST00000535926 RAD51CO43502 376 aa20.52■□□□□ 0.87
CHPF-203ENST00000535926 USP11P51784 963 aa20.52■□□□□ 0.87
CHPF-203ENST00000535926 GIT2Q14161 759 aa20.52■□□□□ 0.87
CHPF-203ENST00000535926 GBP6Q6ZN66 633 aa20.52■□□□□ 0.87
CHPF-203ENST00000535926 PACS2Q86VP3 889 aa20.52■□□□□ 0.87
CHPF-203ENST00000535926 CYP3A7-CYP3A51PA0A087WV96 503 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 MEIS2O14770 477 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 CYP3A7P24462 503 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 SKOR1P84550 965 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 PTPROQ16827 1216 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 KCTD19Q17RG1 926 aaPredicted RBP20.51■□□□□ 0.87
CHPF-203ENST00000535926 CDC42EP5Q6NZY7 148 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 USP38Q8NB14 1042 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 UCHL3P15374 230 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 HOXA10P31260 410 aaPredicted RBP20.51■□□□□ 0.87
CHPF-203ENST00000535926 PABPC4Q13310 644 aaKnown RBP eCLIP20.51■□□□□ 0.876e-6■■■■□ 23.1
CHPF-203ENST00000535926 KLHL7Q8IXQ5 586 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 RBM46Q8TBY0 533 aaKnown RBP20.51■□□□□ 0.87
CHPF-203ENST00000535926 MBOAT7Q96N66 472 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 TMEM59LQ9UK28 342 aa20.51■□□□□ 0.87
CHPF-203ENST00000535926 FAM196BA6NMK8 535 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 SPATA31C1P0DKV0 1188 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 ATP1A2P50993 1020 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 SNAP25P60880 206 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 PAK2Q13177 524 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 PDCLQ13371 301 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 PRR16Q569H4 304 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 DNAJC18Q9H819 358 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 KCNK3O14649 394 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 PON1P27169 355 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 ETNPPLQ8TBG4 499 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 CRYGNQ8WXF5 182 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 TRAF3IP3Q9Y228 551 aa20.5■□□□□ 0.87
CHPF-203ENST00000535926 MYBP10242 640 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 KNOP1Q1ED39 458 aaKnown RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 SFR1Q86XK3 245 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 PROCA1Q8NCQ7 364 aaPredicted RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 REEP2Q9BRK0 252 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 ARMCX3Q9UH62 379 aaPredicted RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 AJAP1Q9UKB5 411 aaPredicted RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 AKAP3O75969 853 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
CHPF-203ENST00000535926 NAP1L4Q99733 375 aaKnown RBP20.49■□□□□ 0.87
CHPF-203ENST00000535926 RSPH10B2B2RC85 870 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 RSPH10BP0C881 870 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 ARHGAP4P98171 946 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 RPS6KA1Q15418 735 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 EPM2AIP1Q7L775 607 aaPredicted RBP20.48■□□□□ 0.87
CHPF-203ENST00000535926 MREGQ8N565 214 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 SPAG5Q96R06 1193 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 PLCB1Q9NQ66 1216 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 NAGPAQ9UK23 515 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 MYO3BQ8WXR4 1341 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 EBAG9O00559 213 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 AFPP02771 609 aaKnown RBP20.48■□□□□ 0.87
CHPF-203ENST00000535926 EEF2P13639 858 aaKnown RBP20.48■□□□□ 0.87
CHPF-203ENST00000535926 DDR1Q08345 913 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 KCNA1Q09470 495 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 DOK7Q18PE1 504 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 SLFN12Q8IYM2 578 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 SYT2Q8N9I0 419 aaPredicted RBP20.48■□□□□ 0.87
CHPF-203ENST00000535926 LRRC57Q8N9N7 239 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 LENG9Q96B70 501 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 COA1Q9GZY4 146 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 SAMM50Q9Y512 469 aa20.48■□□□□ 0.87
CHPF-203ENST00000535926 BTNL10A8MVZ5 291 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 FAM86B1E9PN63 330 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 KIF4AO95239 1232 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 FAM86B2P0C5J1 330 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 TAL1P17542 331 aaPredicted RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 NOP2P46087 812 aaKnown RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 CASP4P49662 377 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 EXOC3L4Q17RC7 722 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 RNPC3Q96LT9 517 aaKnown RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 FAM169AQ9Y6X4 670 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 EP400Q96L91 3159 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 FOCADQ5VW36 1801 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 ZBTB48P10074 688 aaPredicted RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 ERVK-9P63128 1117 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 ALKBH5Q6P6C2 394 aaKnown RBP20.47■□□□□ 0.87
CHPF-203ENST00000535926 EFCAB13Q8IY85 973 aa20.47■□□□□ 0.87
CHPF-203ENST00000535926 PPM1EQ8WY54 764 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms