RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 HHIPL2Q6UWX4 724 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 OVCH1Q7RTY7 1134 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 IGDCC4Q8TDY8 1250 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 DDX1Q92499 740 aaKnown RBP7.51□□□□□ -1.21
PRKDC-205ENST00000535375 LCORQ96JN0 433 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-205ENST00000535375 SAMD15Q9P1V8 674 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 ZFP69BQ9UJL9 534 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-205ENST00000535375 SLC12A8A0AV02 714 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 MROH6A6NGR9 719 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 ZNF839A8K0R7 811 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 HIP1RO75146 1068 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 ASLP04424 464 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 TMEM177Q53S58 311 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 BORAQ6PGQ7 559 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 C16orf86Q6ZW13 317 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 UBE2R2Q712K3 238 aaPredicted RBP7.5□□□□□ -1.21
PRKDC-205ENST00000535375 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 FANCLQ9NW38 375 aa7.5□□□□□ -1.21
PRKDC-205ENST00000535375 A0A0G2JLL6 359 aaPredicted RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 RFPL3O75679 317 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 KCNA6P17658 529 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 RTP5Q14D33 572 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 SMAD2Q15796 467 aaKnown RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 UBXN11Q5T124 520 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 ZCCHC8Q6NZY4 707 aaKnown RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 NOP9Q86U38 636 aaKnown RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 STPG3Q8N7X2 389 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 RELTQ969Z4 430 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 C20orf173Q96LM9 149 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 TEPSINQ96N21 525 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 ADAM7Q9H2U9 754 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 CABP5Q9NP86 173 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
PRKDC-205ENST00000535375 TNPO3Q9Y5L0 923 aaKnown RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
PRKDC-205ENST00000535375 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 KRTAP9-7A8MTY7 169 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 CDC45O75419 566 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 C4BPAP04003 597 aaKnown RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 CHGBP05060 677 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 RANGAP1P46060 587 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 CPZQ66K79 652 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 PKN3Q6P5Z2 889 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 ABHD17CQ6PCB6 329 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 DPP8Q6V1X1 898 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 WDR48Q8TAF3 677 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 YTHDC1Q96MU7 727 aaKnown RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 TACO1Q9BSH4 297 aaKnown RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 BARX1Q9HBU1 254 aaPredicted RBP7.48□□□□□ -1.21
PRKDC-205ENST00000535375 KCNH7Q9NS40 1196 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 ADAMTS20P59510 1910 aa7.48□□□□□ -1.21
PRKDC-205ENST00000535375 M0R2C6 588 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 DNAJC8O75937 253 aaPredicted RBP7.47□□□□□ -1.21
PRKDC-205ENST00000535375 KRT37O76014 449 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 HERVK_113P62684 666 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 TMEM132BQ14DG7 1078 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 ARHGAP44Q17R89 818 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 LGI4Q8N135 537 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 ZCCHC14Q8WYQ9 949 aaKnown RBP7.47□□□□□ -1.21
PRKDC-205ENST00000535375 WNK4Q96J92 1243 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
PRKDC-205ENST00000535375 ZDHHC9Q9Y397 364 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 CD2APQ9Y5K6 639 aa7.47□□□□□ -1.21
PRKDC-205ENST00000535375 SDSP20132 328 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 PTGS1P23219 599 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 CNR2P34972 360 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 IRF9Q00978 393 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 ZNF460Q14592 562 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 CFAP100Q494V2 611 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 PIK3R6Q5UE93 754 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 NOSTRINQ8IVI9 506 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 BOCQ9BWV1 1114 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
PRKDC-205ENST00000535375 B8ZZF3 427 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 H0Y858 1186 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 GLRX3O76003 335 aaKnown RBP7.45□□□□□ -1.22
PRKDC-205ENST00000535375 JMJD7P0C870 316 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 SYN1P17600 705 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 SEC23AQ15436 765 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 ZFYVE27Q5T4F4 411 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 CHST14Q8NCH0 376 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 HIPK4Q8NE63 616 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 INCENPQ9NQS7 918 aa7.45□□□□□ -1.22
PRKDC-205ENST00000535375 INTS7Q9NVH2 962 aaKnown RBP7.45□□□□□ -1.22
PRKDC-205ENST00000535375 PRRG2O14669 202 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 FOXP2O15409 715 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 FOXD2O60548 495 aaPredicted RBP7.44□□□□□ -1.22
PRKDC-205ENST00000535375 KNG1P01042 644 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 MMEP08473 750 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 AOAHP28039 575 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 NEK4P51957 841 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 NFATC3Q12968 1075 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 JAZF1Q86VZ6 243 aa7.44□□□□□ -1.22
PRKDC-205ENST00000535375 KLHL36Q8N4N3 616 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms