RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NAPAP54920 295 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 LETM2Q2VYF4 491 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 CCDC38Q502W7 563 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 TTI2Q6NXR4 508 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 NCAPG2Q86XI2 1143 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 SPZ1Q9BXG8 430 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 PANK4Q9NVE7 773 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 NFU1Q9UMS0 254 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 MYH1P12882 1939 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 LGALS16A8MUM7 142 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 CARSP49589 748 aaKnown RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 C16orf86Q6ZW13 317 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 ARHGAP22Q7Z5H3 698 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 FAM81AQ8TBF8 368 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 RAPGEF5Q92565 580 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 CD209Q9NNX6 404 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 GOLGA6L10A6NI86 522 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 CCNT1O60563 726 aaKnown RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 PYGBP11216 843 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 CYLC1P35663 651 aaPredicted RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 MATR3P43243 847 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 MEA1Q16626 185 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 RBM12BQ8IXT5 1001 aaKnown RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 CNBD1Q8NA66 436 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 TRIM47Q96LD4 638 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 ANKRD27Q96NW4 1050 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
SMPD1-210ENST00000534405 TSGA10Q9BZW7 698 aa20.95■□□□□ 0.94
SMPD1-210ENST00000534405 TAF1LQ8IZX4 1826 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 SMCO2A6NFE2 343 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 LAD1O00515 517 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 LDHCP07864 332 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 TCP1P17987 556 aaKnown RBP20.94■□□□□ 0.94
SMPD1-210ENST00000534405 DRD4P21917 467 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 GNPTABQ3T906 1256 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 FKBP15Q5T1M5 1219 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 MAATS1Q7Z4T9 603 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 CABP7Q86V35 215 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 WHAMMQ8TF30 809 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 OSBPL1AQ9BXW6 950 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 SMIM24O75264 130 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 OR52Z1P0C646 297 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 SETSIPP0DME0 302 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 NEDD1Q8NHV4 660 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 ZNF526Q8TF50 670 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-210ENST00000534405 CEP95Q96GE4 821 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 GORASP1Q9BQQ3 440 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 THAP9Q9H5L6 903 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 VAT1LQ9HCJ6 419 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 PLCB1Q9NQ66 1216 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 PLAAQ9Y263 795 aa20.94■□□□□ 0.94
SMPD1-210ENST00000534405 LUC7L2Q9Y383 392 aaKnown RBP20.94■□□□□ 0.94
SMPD1-210ENST00000534405 GPR75-ASB3A0A0A6YYF3 556 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 TRAPPC3LQ5T215 181 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 HHATQ5VTY9 493 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 PRR5LQ6MZQ0 368 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 C15orf52Q6ZUT6 534 aaKnown RBP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 LZTS2Q9BRK4 669 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 PSMA7O14818 248 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 NKRFO15226 690 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 UFL1O94874 794 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 KIF4AO95239 1232 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 MYL1P05976 194 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 GLI1P08151 1106 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 EEF1GP26641 437 aaKnown RBP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 HSPA9P38646 679 aaKnown RBP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 RHBDL3P58872 404 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 NONOQ15233 471 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 TSR1Q2NL82 804 aaKnown RBP20.93■□□□□ 0.94
SMPD1-210ENST00000534405 FAM196AQ6ZSG2 479 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 PIGSQ96S52 555 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 TRIM9Q9C026 710 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 CAPN11Q9UMQ6 739 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 HYOU1Q9Y4L1 999 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 DUSP10Q9Y6W6 482 aa20.93■□□□□ 0.94
SMPD1-210ENST00000534405 RASSF10A6NK89 507 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 F8W031 263 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-210ENST00000534405 GCOM1H8Y6P7 765 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-210ENST00000534405 ABLIM1O14639 778 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 MYZAPP0CAP1 466 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 TMOD1P28289 359 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 RANBP1P43487 201 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 STK4Q13043 487 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 BIRC3Q13489 604 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 KRT25Q7Z3Z0 450 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 CPLX4Q7Z7G2 160 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 SDCCAG8Q86SQ7 713 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-210ENST00000534405 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
SMPD1-210ENST00000534405 NHSQ6T4R5 1651 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 A0A1W2PQC6 194 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 MACROD2A1Z1Q3 448 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 NPTXRO95502 500 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 FCER1AP12319 257 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 TECP42680 631 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 CCDC197Q8NCU1 140 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 ATL2Q8NHH9 583 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 UBA5Q9GZZ9 404 aa20.92■□□□□ 0.94
SMPD1-210ENST00000534405 KLK7P49862 253 aa20.91■□□□□ 0.94
SMPD1-210ENST00000534405 PPP2R2AP63151 447 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms