RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 PCYT2Q99447 389 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 SH3GLB2Q9NR46 395 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 TMEM260Q9NX78 707 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
CAPN1-228ENST00000534373 CUL9Q8IWT3 2517 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 CHRNA1P02708 482 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 CTSHP09668 335 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 INSRRP14616 1297 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 MARK3P27448 753 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 ERVK-21P61565 698 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 HTRA4P83105 476 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 ITGB3BPQ13352 177 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 MARCH8Q5T0T0 291 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 JAKMIP3Q5VZ66 844 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 REXO1Q8N1G1 1221 aaKnown RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 CCDC148Q8NFR7 591 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 TOP1MTQ969P6 601 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 ZNF274Q96GC6 653 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 TGS1Q96RS0 853 aaKnown RBP15.25■□□□□ 0.03
CAPN1-228ENST00000534373 CERS4Q9HA82 394 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 TBC1D22BQ9NU19 505 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 THEGQ9P2T0 379 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 SQORQ9Y6N5 450 aa15.25■□□□□ 0.03
CAPN1-228ENST00000534373 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 LCHNA4D1U4 455 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 ARHGEF15O94989 841 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 SETQ01105 290 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-228ENST00000534373 CCDC85BQ15834 202 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-228ENST00000534373 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-228ENST00000534373 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 MYOCDQ8IZQ8 938 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-228ENST00000534373 PHKBQ93100 1093 aa15.24■□□□□ 0.03
CAPN1-228ENST00000534373 IFIH1Q9BYX4 1025 aaKnown RBP15.24■□□□□ 0.03
CAPN1-228ENST00000534373 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 LINC01553A4QN01 128 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 RFXAPO00287 272 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 IPO5O00410 1097 aaKnown RBP15.23■□□□□ 0.03
CAPN1-228ENST00000534373 DHX15O43143 795 aaKnown RBP15.23■□□□□ 0.03
CAPN1-228ENST00000534373 CIITAP33076 1130 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 MRPS5P82675 430 aaKnown RBP15.23■□□□□ 0.03
CAPN1-228ENST00000534373 MGAT3Q09327 533 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 TOB2Q14106 344 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-228ENST00000534373 PLCB4Q15147 1175 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 IER5Q5VY09 327 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 FAM160B1Q5W0V3 765 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 ABHD15Q6UXT9 468 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 RUFY4Q6ZNE9 571 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 TRIM22Q8IYM9 498 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 NME8Q8N427 588 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 SP7Q8TDD2 431 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-228ENST00000534373 DNAJB3Q8WWF6 145 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 ASB2Q96Q27 587 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 TRPC6Q9Y210 931 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 PTPRSQ13332 1948 aa15.23■□□□□ 0.03
CAPN1-228ENST00000534373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-228ENST00000534373 HBP1O60381 514 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 USP11P51784 963 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 CCT2P78371 535 aaKnown RBP15.22■□□□□ 0.03
CAPN1-228ENST00000534373 GRB10Q13322 594 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 AAK1Q2M2I8 961 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 ZNF746Q6NUN9 644 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-228ENST00000534373 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 CPLX2Q6PUV4 134 aaKnown RBP15.22■□□□□ 0.03
CAPN1-228ENST00000534373 ZNF577Q9BSK1 485 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 C22orf23Q9BZE7 217 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 OSBPL7Q9BZF2 842 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 PRDM6Q9NQX0 595 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 TRANK1O15050 2925 aa15.22■□□□□ 0.03
CAPN1-228ENST00000534373 MICAL3Q7RTP6 2002 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 SMIM35A0A1B0GVV1 85 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 LPXNO60711 386 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 CCNE2O96020 404 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 IGBP1P78318 339 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 MRPS6P82932 125 aaKnown RBP15.21■□□□□ 0.03
CAPN1-228ENST00000534373 SSRP1Q08945 709 aaKnown RBP15.21■□□□□ 0.03
CAPN1-228ENST00000534373 LPIN1Q14693 890 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 FBXO47Q5MNV8 452 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 FAM117BQ6P1L5 589 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 SMAP1Q8IYB5 467 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-228ENST00000534373 ATP8B4Q8TF62 1192 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 YME1L1Q96TA2 773 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.03
CAPN1-228ENST00000534373 COG5Q9UP83 839 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms