RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MTRQ99707 1265 aa12.26□□□□□ -0.45
AMBRA1-211ENST00000533727 TLDC2A0PJX2 215 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 PFDN6O15212 129 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MARK3P27448 753 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 OR8K1Q8NGG5 319 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 ZNF609O15014 1411 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SPDYE2BA6NHP3 402 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SPDYE6P0CI01 402 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MAPK4P31152 587 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 LRMPQ12912 555 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 TAOK1Q7L7X3 1001 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 TSC1Q92574 1164 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MSTO1Q9BUK6 570 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 PCDHA10Q9Y5I2 948 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 ZNF75DP51815 510 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 ATP11AP98196 1134 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 CXCL9Q07325 125 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 KRT81Q14533 505 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 TWF2Q6IBS0 349 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 CROCCP2Q86T23 111 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 P2RX5Q93086 422 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SLC9A2Q9UBY0 812 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MAGEB2O15479 319 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SCFD2Q8WU76 684 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 EHD4Q9H223 541 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SMARCAD1Q9H4L7 1026 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MROH8Q9H579 483 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 FAM207AQ9NSI2 230 aaPredicted RBP12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 MAP3K20Q9NYL2 800 aaKnown RBP12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 SLC8A2Q9UPR5 921 aa12.25□□□□□ -0.45
AMBRA1-211ENST00000533727 AFPP02771 609 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 SNAP25P60880 206 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 EPHA7Q15375 998 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 RNF180Q86T96 592 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 BEST2Q8NFU1 509 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 NCAPGQ9BPX3 1015 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 RCOR1Q9UKL0 485 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 USTQ9Y2C2 406 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 NFKBIAP25963 317 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 EFNA5P52803 228 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 GABPAQ06546 454 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 NR5A1Q13285 461 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 ZNF658Q5TYW1 1059 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 KCTD17Q8N5Z5 321 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 SMC1BQ8NDV3 1235 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 RAB20Q9NX57 234 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 KIAA0391O15091 583 aaKnown RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 LRRC63Q05C16 580 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 MIPOL1Q8TD10 442 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 NAPGQ99747 312 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 LRRC4Q9HBW1 653 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 PCDHB4Q9Y5E5 795 aa12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.24□□□□□ -0.45
AMBRA1-211ENST00000533727 STXBP3O00186 592 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 IL1R1P14778 569 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CIITAP33076 1130 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 LINC00301Q8NCQ3 95 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 TRIM7Q9C029 511 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 BHMT2Q9H2M3 363 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CXCL11O14625 94 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 HOXC6P09630 235 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 ACTN1P12814 892 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 SCP2P22307 547 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 ATP5DP30049 168 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 ALDH3A1P30838 453 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CEP55Q53EZ4 464 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CYB5R4Q7L1T6 521 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CACNA2D3Q8IZS8 1091 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 TMEM39BQ9GZU3 492 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 NOC2LQ9Y3T9 749 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 PEX26Q7Z412 305 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 SRGAP1Q7Z6B7 1085 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 JPH1Q9HDC5 661 aaPredicted RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 AMFRQ9UKV5 643 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 FAM205AQ6ZU69 1335 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 TBX3O15119 743 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 SETSIPP0DME0 302 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CPT1AP50416 773 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms