RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 FAM86B1E9PN63 330 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 MEIS1O00470 390 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 BACH1O14867 736 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 FAM86B2P0C5J1 330 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 NLRP5P59047 1200 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 RUFY4Q6ZNE9 571 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 MYOCDQ8IZQ8 938 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 USP38Q8NB14 1042 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 BICD2Q8TD16 824 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 SEPT8Q92599 483 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 FAM49AQ9H0Q0 323 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-225ENST00000533704 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 TUBE1Q9UJT0 475 aa11.88□□□□□ -0.51
CAPN1-225ENST00000533704 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 RFXAPO00287 272 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 EFCAB14O75071 495 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 CAND2O75155 1236 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 ARHGEF15O94989 841 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 INSRRP14616 1297 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 STAT5BP51692 787 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 EVCP57679 992 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 MCTP2Q6DN12 878 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
CAPN1-225ENST00000533704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPN1-225ENST00000533704 RSPH3Q86UC2 560 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 TRAPPC12Q8WVT3 735 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 ZBTB10Q96DT7 871 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 ZNF274Q96GC6 653 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-225ENST00000533704 PCYT2Q99447 389 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 ZNF577Q9BSK1 485 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 CDH23Q9H251 3354 aa11.87□□□□□ -0.51
CAPN1-225ENST00000533704 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
CAPN1-225ENST00000533704 DTNBO60941 627 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 UPP2O95045 317 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 CCNE2O96020 404 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 AMHP03971 560 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 CYP3A4P08684 503 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 ADAM17P78536 824 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 TAP1Q03518 808 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 PRR16Q569H4 304 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 PLEKHG4Q58EX7 1191 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 NIPA1Q7RTP0 329 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
CAPN1-225ENST00000533704 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 MTUS1Q9ULD2 1270 aa11.86□□□□□ -0.51
CAPN1-225ENST00000533704 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 RRN3P2A6NIE6 340 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 GJB5O95377 273 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 DEXIO95424 95 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 CHRNA1P02708 482 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 GHRP10912 638 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 SETQ01105 290 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 TMEM62Q0P6H9 643 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 MIS18BP1Q6P0N0 1132 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 PLPPR4Q7Z2D5 763 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 TNPO1Q92973 898 aaKnown RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 IFIH1Q9BYX4 1025 aaKnown RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 ZNF302Q9NR11 478 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
CAPN1-225ENST00000533704 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
CAPN1-225ENST00000533704 MBLAC1A4D2B0 266 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-225ENST00000533704 EPOPA6NHQ4 379 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
CAPN1-225ENST00000533704 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
CAPN1-225ENST00000533704 FAM26DQ5JW98 314 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 MARCH8Q5T0T0 291 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 PDXDC2PQ6P474 469 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 ABHD15Q6UXT9 468 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-225ENST00000533704 CRYGNQ8WXF5 182 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 RAD9AQ99638 391 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 PCDHA4Q9UN74 947 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
CAPN1-225ENST00000533704 M0QZ92 97 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 DHX15O43143 795 aaKnown RBP11.83□□□□□ -0.52
CAPN1-225ENST00000533704 CHMP2AO43633 222 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 CDKL5O76039 1030 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 ATG7O95352 703 aa11.83□□□□□ -0.52
CAPN1-225ENST00000533704 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-225ENST00000533704 MGAT3Q09327 533 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms