RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SLC26A6Q9BXS9 759 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 SH3GLB2Q9NR46 395 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 TUBE1Q9UJT0 475 aa26.7■■□□□ 1.86
SMPD1-209ENST00000533196 EYSQ5T1H1 3165 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 CHD7Q9P2D1 2997 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 AMHP03971 560 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 CTSHP09668 335 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 MARK3P27448 753 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 SLC26A2P50443 739 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 SETQ01105 290 aaPredicted RBP26.69■■□□□ 1.86
SMPD1-209ENST00000533196 PLA2G4DQ86XP0 818 aa26.69■■□□□ 1.86
SMPD1-209ENST00000533196 FAM86B1E9PN63 330 aa26.68■■□□□ 1.86
SMPD1-209ENST00000533196 FAM86B2P0C5J1 330 aa26.68■■□□□ 1.86
SMPD1-209ENST00000533196 STAT5BP51692 787 aa26.68■■□□□ 1.86
SMPD1-209ENST00000533196 CCT2P78371 535 aaKnown RBP26.68■■□□□ 1.86
SMPD1-209ENST00000533196 TRIM22Q8IYM9 498 aa26.68■■□□□ 1.86
SMPD1-209ENST00000533196 IGLV3-22A0A075B6J6 115 aa26.67■■□□□ 1.86
SMPD1-209ENST00000533196 MARCH8Q5T0T0 291 aa26.67■■□□□ 1.86
SMPD1-209ENST00000533196 FAM177A1Q8N128 213 aaPredicted RBP26.67■■□□□ 1.86
SMPD1-209ENST00000533196 PRUNE2Q8WUY3 3088 aa26.67■■□□□ 1.86
SMPD1-209ENST00000533196 PRRC2BQ5JSZ5 2229 aaKnown RBP26.67■■□□□ 1.86
SMPD1-209ENST00000533196 MYH9P35579 1960 aaKnown RBP26.66■■□□□ 1.86
SMPD1-209ENST00000533196 IGKV6D-21A0A0A0MT36 114 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 GTPBP6O43824 516 aaPredicted RBP26.66■■□□□ 1.86
SMPD1-209ENST00000533196 INSRRP14616 1297 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 CIITAP33076 1130 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 TBC1D22BQ9NU19 505 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 TRPC6Q9Y210 931 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 INSL6Q9Y581 213 aa26.66■■□□□ 1.86
SMPD1-209ENST00000533196 IPO5O00410 1097 aaKnown RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 CPLX1O14810 134 aa26.65■■□□□ 1.86
SMPD1-209ENST00000533196 DHX15O43143 795 aaKnown RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 SSRP1Q08945 709 aaKnown RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 PLCB4Q15147 1175 aa26.65■■□□□ 1.86
SMPD1-209ENST00000533196 FAM160B1Q5W0V3 765 aa26.65■■□□□ 1.86
SMPD1-209ENST00000533196 CPLX2Q6PUV4 134 aaKnown RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 RUFY4Q6ZNE9 571 aa26.65■■□□□ 1.86
SMPD1-209ENST00000533196 TMCO2Q7Z6W1 182 aaPredicted RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 PPM1EQ8WY54 764 aa26.65■■□□□ 1.86
SMPD1-209ENST00000533196 COL25A1Q9BXS0 654 aaPredicted RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 NCOA5Q9HCD5 579 aaKnown RBP26.65■■□□□ 1.86
SMPD1-209ENST00000533196 ARHGEF15O94989 841 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 CHRNA1P02708 482 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 MGAT3Q09327 533 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 ABHD15Q6UXT9 468 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 MYOCDQ8IZQ8 938 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 ARNTL2Q8WYA1 636 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 SYMPKQ92797 1274 aaKnown RBP26.64■■□□□ 1.86
SMPD1-209ENST00000533196 ZNF577Q9BSK1 485 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 IFIH1Q9BYX4 1025 aaKnown RBP26.64■■□□□ 1.86
SMPD1-209ENST00000533196 C22orf23Q9BZE7 217 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 UPF3BQ9BZI7 483 aaKnown RBP26.64■■□□□ 1.86
SMPD1-209ENST00000533196 TSPYL2Q9H2G4 693 aaPredicted RBP26.64■■□□□ 1.86
SMPD1-209ENST00000533196 CERS4Q9HA82 394 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 PDRG1Q9NUG6 133 aa26.64■■□□□ 1.86
SMPD1-209ENST00000533196 SIP14410 1827 aa26.64■■□□□ 1.85
SMPD1-209ENST00000533196 LCHNA4D1U4 455 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 EIF5BO60841 1220 aaKnown RBP26.63■■□□□ 1.85
SMPD1-209ENST00000533196 DEXIO95424 95 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 CCNE2O96020 404 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 HTRA4P83105 476 aaPredicted RBP26.63■■□□□ 1.85
SMPD1-209ENST00000533196 MIS18BP1Q6P0N0 1132 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 DNAJB3Q8WWF6 145 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 ATXN2LQ8WWM7 1075 aaKnown RBP26.63■■□□□ 1.85
SMPD1-209ENST00000533196 VPS54Q9P1Q0 977 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 PCDHA2Q9Y5H9 948 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 MTCH2Q9Y6C9 303 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 SQORQ9Y6N5 450 aa26.63■■□□□ 1.85
SMPD1-209ENST00000533196 POTEB3A0JP26 581 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 ADAMTS3O15072 1205 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 USP11P51784 963 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 ANAPC15P60006 121 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 ERVK-21P61565 698 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 IGBP1P78318 339 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 IER5Q5VY09 327 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 ZNF746Q6NUN9 644 aaPredicted RBP26.62■■□□□ 1.85
SMPD1-209ENST00000533196 POTEBQ6S5H4 581 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 SMAP1Q8IYB5 467 aaPredicted RBP26.62■■□□□ 1.85
SMPD1-209ENST00000533196 TOP1MTQ969P6 601 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 TGS1Q96RS0 853 aaKnown RBP26.62■■□□□ 1.85
SMPD1-209ENST00000533196 LMCD1Q9NZU5 365 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 THEGQ9P2T0 379 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 TCEAL9Q9UHQ7 104 aa26.62■■□□□ 1.85
SMPD1-209ENST00000533196 LINC01553A4QN01 128 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 EPOPA6NHQ4 379 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 DDX39AO00148 427 aaKnown RBP26.61■■□□□ 1.85
SMPD1-209ENST00000533196 RFXAPO00287 272 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 BACH1O14867 736 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 HBP1O60381 514 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 NLRP5P59047 1200 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 MRPS6P82932 125 aaKnown RBP26.61■■□□□ 1.85
SMPD1-209ENST00000533196 KRT76Q01546 638 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 CCDC85BQ15834 202 aaPredicted RBP26.61■■□□□ 1.85
SMPD1-209ENST00000533196 TJAP1Q5JTD0 557 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 SP7Q8TDD2 431 aaPredicted RBP26.61■■□□□ 1.85
SMPD1-209ENST00000533196 OSBPL7Q9BZF2 842 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 ZNF302Q9NR11 478 aa26.61■■□□□ 1.85
SMPD1-209ENST00000533196 COL4A6Q14031 1691 aa26.6■■□□□ 1.85
SMPD1-209ENST00000533196 COL1A2P08123 1366 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms