RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 CHRNA1P02708 482 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 ACTR2P61160 394 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 PPFIA1Q13136 1202 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 CCDC85BQ15834 202 aaPredicted RBP21.61■■□□□ 1.05
SSH3-209ENST00000532600 GRIK4Q16099 956 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 LARP6Q9BRS8 491 aaKnown RBP21.61■■□□□ 1.05
SSH3-209ENST00000532600 GLT8D2Q9H1C3 349 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 SMARCAD1Q9H4L7 1026 aa21.61■■□□□ 1.05
SSH3-209ENST00000532600 KIF28PB7ZC32 967 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 DHX15O43143 795 aaKnown RBP21.6■■□□□ 1.05
SSH3-209ENST00000532600 ATG7O95352 703 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 CYP3A4P08684 503 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 IFNAR1P17181 557 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 CCT2P78371 535 aaKnown RBP21.6■■□□□ 1.05
SSH3-209ENST00000532600 MGAT3Q09327 533 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 KRT40Q6A162 431 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 ARNTL2Q8WYA1 636 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 GLG1Q92896 1179 aa21.6■■□□□ 1.05
SSH3-209ENST00000532600 LPXNO60711 386 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 POU3F3P20264 500 aaPredicted RBP21.59■■□□□ 1.05
SSH3-209ENST00000532600 FAM117BQ6P1L5 589 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 NIPA1Q7RTP0 329 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 RPAINQ86UA6 219 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 RASGRP4Q8TDF6 673 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 UIMC1Q96RL1 719 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 RNF26Q9BY78 433 aaPredicted RBP21.59■■□□□ 1.05
SSH3-209ENST00000532600 MTCH2Q9Y6C9 303 aa21.59■■□□□ 1.05
SSH3-209ENST00000532600 PRRC2BQ5JSZ5 2229 aaKnown RBP21.59■■□□□ 1.05
SSH3-209ENST00000532600 IGKV6D-21A0A0A0MT36 114 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.58■■□□□ 1.05
SSH3-209ENST00000532600 EFCAB14O75071 495 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 INSRRP14616 1297 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 PLCB4Q15147 1175 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 RAD9AQ99638 391 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 SDF4Q9BRK5 362 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 UPF3BQ9BZI7 483 aaKnown RBP21.58■■□□□ 1.05
SSH3-209ENST00000532600 TM6SF1Q9BZW5 370 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 TUBE1Q9UJT0 475 aa21.58■■□□□ 1.05
SSH3-209ENST00000532600 LINC01553A4QN01 128 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 DDX39AO00148 427 aaKnown RBP21.57■■□□□ 1.04
SSH3-209ENST00000532600 PLA2G4DQ86XP0 818 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 REXO1Q8N1G1 1221 aaKnown RBP21.57■■□□□ 1.04
SSH3-209ENST00000532600 TRAPPC12Q8WVT3 735 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 SEPT8Q92599 483 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 ZBED2Q9BTP6 218 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 C6orf50Q9HD87 102 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 VPS54Q9P1Q0 977 aa21.57■■□□□ 1.04
SSH3-209ENST00000532600 ZNF76P36508 570 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 IGBP1P78318 339 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 HTRA4P83105 476 aaPredicted RBP21.56■■□□□ 1.04
SSH3-209ENST00000532600 GRB10Q13322 594 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 LPIN1Q14693 890 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 TAF2Q6P1X5 1199 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 ABHD15Q6UXT9 468 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 PLPPR4Q7Z2D5 763 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 MYOCDQ8IZQ8 938 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 DNAJB3Q8WWF6 145 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 LENG9Q96B70 501 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 CYP46A1Q9Y6A2 500 aa21.56■■□□□ 1.04
SSH3-209ENST00000532600 TTC28Q96AY4 2481 aa21.55■■□□□ 1.04
SSH3-209ENST00000532600 AMHP03971 560 aa21.55■■□□□ 1.04
SSH3-209ENST00000532600 GHRP10912 638 aa21.55■■□□□ 1.04
SSH3-209ENST00000532600 STAT5BP51692 787 aa21.55■■□□□ 1.04
SSH3-209ENST00000532600 SP7Q8TDD2 431 aaPredicted RBP21.55■■□□□ 1.04
SSH3-209ENST00000532600 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
SSH3-209ENST00000532600 AZI2Q9H6S1 392 aa21.55■■□□□ 1.04
SSH3-209ENST00000532600 ATP4AP20648 1035 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 CIITAP33076 1130 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 ERVK-21P61565 698 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 CCDC60Q8IWA6 550 aaPredicted RBP21.54■■□□□ 1.04
SSH3-209ENST00000532600 MICALL1Q8N3F8 863 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 TOP1MTQ969P6 601 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 IL17RAQ96F46 866 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 ZNF274Q96GC6 653 aaPredicted RBP21.54■■□□□ 1.04
SSH3-209ENST00000532600 IFIH1Q9BYX4 1025 aaKnown RBP21.54■■□□□ 1.04
SSH3-209ENST00000532600 TRPC6Q9Y210 931 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 CDY2AQ9Y6F7 541 aa21.54■■□□□ 1.04
SSH3-209ENST00000532600 RRN3P2A6NIE6 340 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 IPO5O00410 1097 aaKnown RBP21.53■■□□□ 1.04
SSH3-209ENST00000532600 GNA11P29992 359 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 NPY5RQ15761 445 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 FBXO47Q5MNV8 452 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 GDPD5Q8WTR4 605 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 FAM49AQ9H0Q0 323 aaPredicted RBP21.53■■□□□ 1.04
SSH3-209ENST00000532600 SUGCTQ9HAC7 445 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 MTUS1Q9ULD2 1270 aa21.53■■□□□ 1.04
SSH3-209ENST00000532600 POTEB3A0JP26 581 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 ZBTB42B2RXF5 422 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 MRPS6P82932 125 aaKnown RBP21.52■■□□□ 1.04
SSH3-209ENST00000532600 AKAP17AQ02040 695 aaKnown RBP21.52■■□□□ 1.04
SSH3-209ENST00000532600 POTEBQ6S5H4 581 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 APBB2Q92870 758 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 AIFM3Q96NN9 605 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 TGS1Q96RS0 853 aaKnown RBP21.52■■□□□ 1.04
SSH3-209ENST00000532600 C17orf80Q9BSJ5 609 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 ZNF577Q9BSK1 485 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 BACH2Q9BYV9 841 aa21.52■■□□□ 1.04
SSH3-209ENST00000532600 AGO3Q9H9G7 860 aaKnown RBP21.52■■□□□ 1.04
SSH3-209ENST00000532600 SH3GLB2Q9NR46 395 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms