RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 MMP1P03956 469 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 THPOP40225 353 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 RBL2Q08999 1139 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 PLCB4Q15147 1175 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 FAM109BQ6ICB4 259 aaPredicted RBP19.73■□□□□ 0.75
CTSB-223ENST00000532370 SWSAP1Q6NVH7 229 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 PSRC1Q6PGN9 363 aaPredicted RBP19.73■□□□□ 0.75
CTSB-223ENST00000532370 LRRC8DQ7L1W4 858 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 PLPPR4Q7Z2D5 763 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 CCDC60Q8IWA6 550 aaPredicted RBP19.73■□□□□ 0.75
CTSB-223ENST00000532370 RPUSD2Q8IZ73 545 aaKnown RBP19.73■□□□□ 0.75
CTSB-223ENST00000532370 CCDC155Q8N6L0 562 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 AFAP1L1Q8TED9 768 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 SLC5A5Q92911 643 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 DDX25Q9UHL0 483 aaKnown RBP19.73■□□□□ 0.75
CTSB-223ENST00000532370 NRCAMQ92823 1304 aa19.73■□□□□ 0.75
CTSB-223ENST00000532370 GNAT1P11488 350 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 INSRRP14616 1297 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 IGBP1P78318 339 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 TRIM29Q14134 588 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 GRIK4Q16099 956 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 MARCH8Q5T0T0 291 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 RASIP1Q5U651 963 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 ZNF746Q6NUN9 644 aaPredicted RBP19.72■□□□□ 0.75
CTSB-223ENST00000532370 MIS18BP1Q6P0N0 1132 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 RUFY4Q6ZNE9 571 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 NEK8Q86SG6 692 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 DIS3L2Q8IYB7 885 aaKnown RBP19.72■□□□□ 0.75
CTSB-223ENST00000532370 ETNPPLQ8TBG4 499 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 HERVK_113Q902F9 699 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 DOCK5Q9H7D0 1870 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 BRMS1Q9HCU9 246 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 TRPC6Q9Y210 931 aa19.72■□□□□ 0.75
CTSB-223ENST00000532370 CHMP2AO43633 222 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 GAS7O60861 476 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 NBNO60934 754 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 ATP4AP20648 1035 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 KRT76Q01546 638 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 MBTPS1Q14703 1052 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 LRCH2Q5VUJ6 765 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 MOXD1Q6UVY6 613 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 TRAPPC12Q8WVT3 735 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 TMX3Q96JJ7 454 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 RIT2Q99578 217 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 FTOQ9C0B1 505 aaKnown RBP eCLIP19.71■□□□□ 0.753e-19■□□□□ 9.3
CTSB-223ENST00000532370 UNC45AQ9H3U1 944 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 ZNF302Q9NR11 478 aa19.71■□□□□ 0.75
CTSB-223ENST00000532370 POTEB3A0JP26 581 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 GRXCR1A8MXD5 290 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 CCNT1O60563 726 aaKnown RBP19.7■□□□□ 0.74
CTSB-223ENST00000532370 PSMD10O75832 226 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 RFC2P35250 354 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 TCTN1Q2MV58 587 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 POTEBQ6S5H4 581 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
CTSB-223ENST00000532370 C8orf76Q96K31 380 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 OSBPL7Q9BZF2 842 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 SAMM50Q9Y512 469 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 PCDHA10Q9Y5I2 948 aa19.7■□□□□ 0.74
CTSB-223ENST00000532370 MBLAC1A4D2B0 266 aaPredicted RBP19.69■□□□□ 0.74
CTSB-223ENST00000532370 WNT7AO00755 349 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 PSAPP07602 524 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 CTSHP09668 335 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 HMGN5P82970 282 aaKnown RBP19.69■□□□□ 0.74
CTSB-223ENST00000532370 FAM160B1Q5W0V3 765 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 PPP4R3AQ6IN85 833 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 Q7L0L9 218 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 TRMT1LQ7Z2T5 733 aaKnown RBP19.69■□□□□ 0.74
CTSB-223ENST00000532370 TEKT3Q9BXF9 490 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 DISC1Q9NRI5 854 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 GABBR1Q9UBS5 961 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 TCEAL9Q9UHQ7 104 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 TUBE1Q9UJT0 475 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 MAFBQ9Y5Q3 323 aaPredicted RBP19.69■□□□□ 0.74
CTSB-223ENST00000532370 CDH23Q9H251 3354 aa19.69■□□□□ 0.74
CTSB-223ENST00000532370 WDR64B1ANS9 1081 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 RSPH10B2B2RC85 870 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 PFKMP08237 780 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 RSPH10BP0C881 870 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 SLC26A2P50443 739 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 B3GNT9Q6UX72 402 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 FAM184AQ8NB25 1140 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 ATP8B4Q8TF62 1192 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 HAS1Q92839 578 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 KCNMB3Q9NPA1 279 aa19.68■□□□□ 0.74
CTSB-223ENST00000532370 RRN3P2A6NIE6 340 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 ZBBXA8MT70 800 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 SLC34A2O95436 690 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 CXCL10P02778 98 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 GCFC2P16383 781 aaKnown RBP19.67■□□□□ 0.74
CTSB-223ENST00000532370 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
CTSB-223ENST00000532370 UGCGQ16739 394 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 CKAP2LQ8IYA6 745 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 FBXO18Q8NFZ0 1043 aa19.67■□□□□ 0.74
CTSB-223ENST00000532370 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.66■□□□□ 0.74
CTSB-223ENST00000532370 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.66■□□□□ 0.74
CTSB-223ENST00000532370 ZBTB42B2RXF5 422 aa19.66■□□□□ 0.74
CTSB-223ENST00000532370 ZNF862O60290 1169 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms