RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 NFASCO94856 1347 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 ARP10275 920 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 CLK2P49760 499 aaKnown RBP18.03■□□□□ 0.48
CPSF1-205ENST00000531042 KCNQ1P51787 676 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 MGAT3Q09327 533 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 AP3B2Q13367 1082 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 CEP55Q53EZ4 464 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 SDF4Q9BRK5 362 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 TMEM260Q9NX78 707 aa18.03■□□□□ 0.48
CPSF1-205ENST00000531042 MEIS1O00470 390 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 UPP2O95045 317 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 GHRP10912 638 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 INSRRP14616 1297 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 CPA1P15085 419 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 ADD1P35611 737 aaKnown RBP18.02■□□□□ 0.48
CPSF1-205ENST00000531042 SREBF1P36956 1147 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 ACTR2P61160 394 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 FGD1P98174 961 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-205ENST00000531042 Q6ZUG5 572 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 RSPH3Q86UC2 560 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 FBXO22Q8NEZ5 403 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 HLA-CQ95604 372 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 YME1L1Q96TA2 773 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 AZI2Q9H6S1 392 aa18.02■□□□□ 0.48
CPSF1-205ENST00000531042 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
CPSF1-205ENST00000531042 NAP1L2Q9ULW6 460 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-205ENST00000531042 COL4A6Q14031 1691 aa18.02■□□□□ 0.47
CPSF1-205ENST00000531042 RRN3P2A6NIE6 340 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 HSPA4P34932 840 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 METAP2P50579 478 aaKnown RBP eCLIP18.01■□□□□ 0.479e-7■■■□□ 16.4
CPSF1-205ENST00000531042 IGBP1P78318 339 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 APOBRQ0VD83 1088 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 LPIN1Q14693 890 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 PFKFB3Q16875 520 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-205ENST00000531042 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
CPSF1-205ENST00000531042 SAMD11Q96NU1 681 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 SNX14Q9Y5W7 946 aa18.01■□□□□ 0.47
CPSF1-205ENST00000531042 CCDC196A0A1B0GTZ2 297 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 ATG7O95352 703 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 EPC2Q52LR7 807 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 NIPA1Q7RTP0 329 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 PLPPR4Q7Z2D5 763 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 TNPO1Q92973 898 aaKnown RBP18■□□□□ 0.47
CPSF1-205ENST00000531042 BRF1Q92994 677 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 ZBTB10Q96DT7 871 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 NECAB3Q96P71 396 aaPredicted RBP18■□□□□ 0.47
CPSF1-205ENST00000531042 CDY2AQ9Y6F7 541 aa18■□□□□ 0.47
CPSF1-205ENST00000531042 NLRC5Q86WI3 1866 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 NCOR1O75376 2440 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 RPLP2P05387 115 aaKnown RBP17.99■□□□□ 0.47
CPSF1-205ENST00000531042 SCG2P13521 617 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 ZNF76P36508 570 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 STAT5BP51692 787 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 MRPS6P82932 125 aaKnown RBP17.99■□□□□ 0.47
CPSF1-205ENST00000531042 PLCB4Q15147 1175 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 FBXO47Q5MNV8 452 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 JAKMIP3Q5VZ66 844 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 BLOC1S2Q6QNY1 142 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 FBXL16Q8N461 479 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 TRPC6Q9Y210 931 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 NID2Q14112 1375 aa17.99■□□□□ 0.47
CPSF1-205ENST00000531042 ENPP3O14638 875 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 PKN1Q16512 942 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 TSHZ1Q6ZSZ6 1077 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 CRYGNQ8WXF5 182 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 IL17RAQ96F46 866 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 ZMYND12Q9H0C1 365 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 FAM49AQ9H0Q0 323 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-205ENST00000531042 PCDHA2Q9Y5H9 948 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 RALGAPA2Q2PPJ7 1873 aa17.98■□□□□ 0.47
CPSF1-205ENST00000531042 IGLV3-22A0A075B6J6 115 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 IGKV6D-21A0A0A0MT36 114 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 POTEB3A0JP26 581 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 FAM86B1E9PN63 330 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 H3BNC9 293 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 ADAMTS3O15072 1205 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 PRPF3O43395 683 aaKnown RBP17.97■□□□□ 0.47
CPSF1-205ENST00000531042 CCNE2O96020 404 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 CYP3A4P08684 503 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 FAM86B2P0C5J1 330 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 IER5Q5VY09 327 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 POTEBQ6S5H4 581 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 ABHD15Q6UXT9 468 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 PLA2G4DQ86XP0 818 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 TMEM192Q8IY95 271 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 TRAPPC12Q8WVT3 735 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
CPSF1-205ENST00000531042 AGXT2Q9BYV1 514 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 AGO3Q9H9G7 860 aaKnown RBP17.97■□□□□ 0.47
CPSF1-205ENST00000531042 SQORQ9Y6N5 450 aa17.97■□□□□ 0.47
CPSF1-205ENST00000531042 LOXHD1Q8IVV2 1947 aa17.96■□□□□ 0.47
CPSF1-205ENST00000531042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-205ENST00000531042 DDX39AO00148 427 aaKnown RBP17.96■□□□□ 0.47
CPSF1-205ENST00000531042 DHX15O43143 795 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms