RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 MBD4O95243 580 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 PDHA1P08559 390 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 CXCR5P32302 372 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 IARSP41252 1262 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 BTG3Q14201 252 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 KBTBD12Q3ZCT8 623 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 MEI1Q5TIA1 1274 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 PDXDC2PQ6P474 469 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ARMCX6Q7L4S7 300 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 COL23A1Q86Y22 540 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 SMYD4Q8IYR2 804 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 LY9Q9HBG7 655 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 DDX43Q9NXZ2 648 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 SALL4Q9UJQ4 1053 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ADAMTSL3P82987 1691 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 A0A1B0GUL6 1792 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 TJP3O95049 919 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 BMP15O95972 392 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 AGTP01019 485 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 PTDSS1P48651 473 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 METAP2P50579 478 aaKnown RBP eCLIP8.85□□□□□ -0.991e-12■□□□□ 10.3
CSDE1-214ENST00000530886 KIF11P52732 1056 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 KPNB1Q14974 876 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 TRADDQ15628 312 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 KRT71Q3SY84 523 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 RRAGBQ5VZM2 374 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 EXOC3L1Q86VI1 746 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 MDM1Q8TC05 714 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 MS4A14Q96JA4 679 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 DPH5Q9H2P9 285 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 TXLNGQ9NUQ3 528 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 IL1RAPL1Q9NZN1 696 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 LARSQ9P2J5 1176 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 USP20Q9Y2K6 914 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 COL18A1P39060 1754 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 BPIFB4P59827 614 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 AKAP4Q5JQC9 854 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ZNF365Q70YC5 407 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 TBC1D10CQ8IV04 446 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ACTRT1Q8TDG2 376 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 PHKBQ93100 1093 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 CARD9Q9H257 536 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ESF1Q9H501 851 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ARHGAP20Q9P2F6 1191 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 ANGEL1Q9UNK9 670 aaKnown RBP8.85□□□□□ -0.99
CSDE1-214ENST00000530886 MAPK8IP1Q9UQF2 711 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 NUB1Q9Y5A7 615 aa8.85□□□□□ -0.99
CSDE1-214ENST00000530886 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 TRAFD1O14545 582 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 NCK2O43639 380 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 EYA4O95677 639 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 SKIP12755 728 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 VHLP40337 213 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 CACNA2D1P54289 1103 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 ADSSL1Q8N142 457 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 FBXO41Q8TF61 875 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 LPIN2Q92539 896 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 NEUROG2Q9H2A3 272 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 LRRC4CQ9HCJ2 640 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 AIPL1Q9NZN9 384 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 DAAM1Q9Y4D1 1078 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 TMEM2Q9UHN6 1383 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 SSU72P8A0A1W2PR75 194 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC188H7C350 402 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 NKRFO15226 690 aaKnown RBP eCLIP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 NVLO15381 856 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 RNMTO43148 476 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 ZFXP17010 805 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 MCL1Q07820 350 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 NPY5RQ15761 445 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 EARS2Q5JPH6 523 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 TBC1D9BQ66K14 1250 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 BTNL9Q6UXG8 535 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 CCDC80Q76M96 950 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 RAB11FIP4Q86YS3 637 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 PUS7LQ9H0K6 701 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 DCLRE1BQ9H816 532 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 INTS9Q9NV88 658 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 SPATA7Q9P0W8 599 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 CNOT7Q9UIV1 285 aaKnown RBP8.84□□□□□ -0.99
CSDE1-214ENST00000530886 PNMA2Q9UL42 364 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 TMEM98Q9Y2Y6 226 aa8.84□□□□□ -0.99
CSDE1-214ENST00000530886 BTNL10A8MVZ5 291 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 BTBD18B2RXH4 712 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 MYBL1P10243 752 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 TRIM21P19474 475 aaKnown RBP8.84□□□□□ -1
CSDE1-214ENST00000530886 AFMP43652 599 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 PSMD7P51665 324 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 FKBP15Q5T1M5 1219 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -1
CSDE1-214ENST00000530886 KIF2BQ8N4N8 673 aa8.84□□□□□ -1
CSDE1-214ENST00000530886 FITM2Q8N6M3 262 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms