RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 SGMS1Q86VZ5 419 aa23.75■■□□□ 1.39
TSPAN4-219ENST00000530404 FAM49AQ9H0Q0 323 aaPredicted RBP23.75■■□□□ 1.39
TSPAN4-219ENST00000530404 SMARCAD1Q9H4L7 1026 aa23.75■■□□□ 1.39
TSPAN4-219ENST00000530404 MBLAC1A4D2B0 266 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 CTNNB1P35222 781 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 NAPAP54920 295 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 TCEAL5Q5H9L2 206 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 FBXO47Q5MNV8 452 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 APOA5Q6Q788 366 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 EP400NLQ6ZTU2 488 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 RPAINQ86UA6 219 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 RSPH3Q86UC2 560 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 FIBCD1Q8N539 461 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 BANK1Q8NDB2 785 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 TRAPPC12Q8WVT3 735 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 IL17RAQ96F46 866 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 MXRA8Q9BRK3 442 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 JPH1Q9HDC5 661 aaPredicted RBP23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 SLC9A2Q9UBY0 812 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 BRPF3Q9ULD4 1205 aa23.74■■□□□ 1.39
TSPAN4-219ENST00000530404 FAM86C2PA6NEL3 165 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 H3BQ06 376 aaPredicted RBP23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 CSPG5O95196 566 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 ARP10275 920 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 INSRRP14616 1297 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 TMEM62Q0P6H9 643 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 TIGD5Q53EQ6 642 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 SYNE3Q6ZMZ3 975 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 NEK1Q96PY6 1258 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 LRFN3Q9BTN0 628 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 KCNH7Q9NS40 1196 aa23.73■■□□□ 1.39
TSPAN4-219ENST00000530404 ENPP3O14638 875 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 MRPS6P82932 125 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 RTN1Q16799 776 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 ADCK5Q3MIX3 580 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 PTCRAQ6ISU1 281 aaPredicted RBP23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 LINC01599Q8WXQ3 324 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 AGO3Q9H9G7 860 aaKnown RBP23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 TMEM260Q9NX78 707 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 TRPC6Q9Y210 931 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 ADGRA3Q8IWK6 1321 aa23.72■■□□□ 1.39
TSPAN4-219ENST00000530404 TRIOO75962 3097 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 LINC00271P0C7V0 271 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 CD52P31358 61 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 TSHZ1Q6ZSZ6 1077 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 RASEFQ8IZ41 740 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 ANO3Q9BYT9 981 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 AZI2Q9H6S1 392 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 RC3H2Q9HBD1 1191 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 RIC8AQ9NPQ8 531 aa23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 RBM28Q9NW13 759 aaKnown RBP23.71■■□□□ 1.39
TSPAN4-219ENST00000530404 STXBP3O00186 592 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 MAFGO15525 162 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 ZBTB43O43298 467 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 ADCY7P51828 1080 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 ACTR2P61160 394 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 EXOSC10Q01780 885 aaKnown RBP23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 FUT2Q10981 343 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 ITGB3BPQ13352 177 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 PLCB4Q15147 1175 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 RNF20Q5VTR2 975 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 FAM178BQ8IXR5 827 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 SDF4Q9BRK5 362 aa23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 NSUN3Q9H649 340 aaKnown RBP23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 V9GY48 417 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-219ENST00000530404 GOLGA8AA7E2F4 631 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 GOLGA8BA8MQT2 603 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 DDX39AO00148 427 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 GRM6O15303 877 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 NEK9Q8TD19 979 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 UIMC1Q96RL1 719 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 AGO4Q9HCK5 861 aaKnown RBP23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 C11orf16Q9NQ32 467 aa23.69■■□□□ 1.38
TSPAN4-219ENST00000530404 NFASCO94856 1347 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 SMCO2A6NFE2 343 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 GRXCR2A6NFK2 248 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 RRN3P2A6NIE6 340 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 CDC27P30260 824 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 SSTR3P32745 418 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 BTG3Q14201 252 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 TMEM31Q5JXX7 168 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 DHX32Q7L7V1 743 aaKnown RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 RTN4RL1Q86UN2 441 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 ZNF689Q96CS4 500 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 CLDND1Q9NY35 253 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 NAP1L2Q9ULW6 460 aaPredicted RBP23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 TRPV2Q9Y5S1 764 aa23.68■■□□□ 1.38
TSPAN4-219ENST00000530404 KLF18A0A0U1RQI7 1052 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 C5orf67F2Z3F1 127 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 IBSPP21815 317 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 BMPR1AP36894 532 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 STAT5BP51692 787 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 CEP55Q53EZ4 464 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 PPP1R18Q6NYC8 613 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 GJD3Q8N144 294 aa23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 PABPC5Q96DU9 382 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 FAM217BQ9NTX9 383 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-219ENST00000530404 CPA1P15085 419 aa23.66■■□□□ 1.38
TSPAN4-219ENST00000530404 IER5Q5VY09 327 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms