RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 MYH9P35579 1960 aaKnown RBP15.78■□□□□ 0.12
USF1-209ENST00000529476 ALPK3Q96L96 1907 aa15.78■□□□□ 0.12
USF1-209ENST00000529476 EMSYQ7Z589 1322 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 UNC80Q8N2C7 3258 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 IGKV6D-21A0A0A0MT36 114 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 LAD1O00515 517 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 BACH1O14867 736 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 F2P00734 622 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 PSAPP07602 524 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 BMP8BP34820 402 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 TECP42680 631 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 PSEN2P49810 448 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.12
USF1-209ENST00000529476 NUCB2P80303 420 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 MFSD10Q14728 455 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 PTPAQ15257 358 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 IL17AQ16552 155 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 SWSAP1Q6NVH7 229 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 CCDC60Q8IWA6 550 aaPredicted RBP15.77■□□□□ 0.12
USF1-209ENST00000529476 GLG1Q92896 1179 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 CHAMP1Q96JM3 812 aa15.77■□□□□ 0.12
USF1-209ENST00000529476 ZNF396Q96N95 335 aaPredicted RBP15.77■□□□□ 0.12
USF1-209ENST00000529476 TFIP11Q9UBB9 837 aaKnown RBP15.77■□□□□ 0.12
USF1-209ENST00000529476 GRIN2DO15399 1336 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 POTEMA6NI47 508 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 H3BRB1 525 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 BMP15O95972 392 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 PRPHP41219 470 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 STAT5BP51692 787 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
USF1-209ENST00000529476 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 KIAA0753Q2KHM9 967 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 RDM1Q8NG50 284 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 SMARCAD1Q9H4L7 1026 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 TUT1Q9H6E5 874 aaKnown RBP15.76■□□□□ 0.11
USF1-209ENST00000529476 AZI2Q9H6S1 392 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 ZNF302Q9NR11 478 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 GABBR1Q9UBS5 961 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
USF1-209ENST00000529476 TCHHQ07283 1943 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
USF1-209ENST00000529476 HAS3O00219 553 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 MARK3P27448 753 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
USF1-209ENST00000529476 UGCGQ16739 394 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 FAM160B1Q5W0V3 765 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 SLC39A5Q6ZMH5 540 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 DTHD1Q6ZMT9 781 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 PLPPR4Q7Z2D5 763 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 AFAP1L1Q8TED9 768 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 KATNAL1Q9BW62 490 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 ERAP1Q9NZ08 941 aa15.75■□□□□ 0.11
USF1-209ENST00000529476 ZNF215Q9UL58 517 aaPredicted RBP15.75■□□□□ 0.11
USF1-209ENST00000529476 ZMYND8Q9ULU4 1186 aaPredicted RBP15.75■□□□□ 0.11
USF1-209ENST00000529476 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
USF1-209ENST00000529476 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 VWA3AA6NCI4 1184 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 MARCKSP29966 332 aaPredicted RBP15.74■□□□□ 0.11
USF1-209ENST00000529476 NASPP49321 788 aaPredicted RBP15.74■□□□□ 0.11
USF1-209ENST00000529476 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 EPHA7Q15375 998 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 LRRC26Q2I0M4 334 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 LRIT3Q3SXY7 679 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 ARL6IP4Q66PJ3 421 aaKnown RBP15.74■□□□□ 0.11
USF1-209ENST00000529476 PDXDC2PQ6P474 469 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.74■□□□□ 0.11
USF1-209ENST00000529476 BANK1Q8NDB2 785 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 RNPEPQ9H4A4 650 aa15.74■□□□□ 0.11
USF1-209ENST00000529476 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
USF1-209ENST00000529476 PP2D1A8MPX8 630 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 ARVCFO00192 962 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 ATP4AP20648 1035 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 GRIN1Q05586 938 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 PLCB4Q15147 1175 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 STK38Q15208 465 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 FAM47CQ5HY64 1035 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 ATL3Q6DD88 541 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 TRMT1LQ7Z2T5 733 aaKnown RBP15.73■□□□□ 0.11
USF1-209ENST00000529476 C7orf61Q8IZ16 206 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 DYDC2Q96IM9 177 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 EIF2AK1Q9BQI3 630 aaKnown RBP15.73■□□□□ 0.11
USF1-209ENST00000529476 RGL1Q9NZL6 768 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 ATP6V1DQ9Y5K8 247 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 KAT6AQ92794 2004 aa15.73■□□□□ 0.11
USF1-209ENST00000529476 ZNF862O60290 1169 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 P4HBP07237 508 aaKnown RBP15.72■□□□□ 0.11
USF1-209ENST00000529476 SMIM10L2AP0DMW4 78 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 SMIM10L2BP0DMW5 78 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 CDK7P50613 346 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 PSMC5P62195 406 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 PRKCEQ02156 737 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 CYP4A11Q02928 519 aa15.72■□□□□ 0.11
USF1-209ENST00000529476 CTTNQ14247 550 aaKnown RBP15.72■□□□□ 0.11
USF1-209ENST00000529476 PDIA5Q14554 519 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms