RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 RUSC1Q9BVN2 902 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 KCTD10Q9H3F6 313 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 STIM2Q9P246 746 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ATP6V0A2Q9Y487 856 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SAMM50Q9Y512 469 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ADAMTSL1Q8N6G6 1762 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SMCHD1A6NHR9 2005 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 EML1O00423 815 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 KCNK3O14649 394 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SERPING1P05155 500 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ZNF76P36508 570 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 COG2Q14746 738 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ZNF662Q6ZS27 426 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ZNF571Q7Z3V5 609 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ADAT2Q7Z6V5 191 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SRLQ86TD4 932 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SIAH1Q8IUQ4 282 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 FAM76AQ8TAV0 307 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CCDC43Q96MW1 224 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ATF5Q9Y2D1 282 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 AKAP3O75969 853 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 GCNT3O95395 438 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TCP1P17987 556 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 NMT1P30419 496 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SLC12A3P55017 1021 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 GIT2Q14161 759 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 IQCEQ6IPM2 695 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 RPGRIP1Q96KN7 1286 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SH2D3AQ9BRG2 576 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TDRD3Q9H7E2 651 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CWC15Q9P013 229 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 COL24A1Q17RW2 1714 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 GRID2IPA4D2P6 1211 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 F5H6K3 240 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CETN3O15182 167 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 SPATA31C1P0DKV0 1188 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CCT5P48643 541 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 AARSP49588 968 aaKnown RBP eCLIP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 ICA1Q05084 483 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 KLRC3Q07444 240 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 PSMD2Q13200 908 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 RRP1BQ14684 758 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TTMPQ5BVD1 217 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 NAA35Q5VZE5 725 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 RBM46Q8TBY0 533 aaKnown RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 COA1Q9GZY4 146 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CHORDC1Q9UHD1 332 aaPredicted RBP8.19□□□□□ -1.1
C11orf54-207ENST00000528288 CEP104O60308 925 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 ZEB2O60315 1214 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 LCA5LO95447 670 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 TUBBP07437 444 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 MCM3P25205 808 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 PDCLQ13371 301 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 COBLL1Q53SF7 1204 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 GPATCH4Q5T3I0 446 aaKnown RBP8.18□□□□□ -1.1
C11orf54-207ENST00000528288 OR2W6PQ8NHA6 318 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 ZIM3Q96PE6 472 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 DDX39AO00148 427 aaKnown RBP8.18□□□□□ -1.1
C11orf54-207ENST00000528288 CFBP00751 764 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 GH2P01242 217 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 COPB2P35606 906 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 GNGT1P63211 74 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 HLTFQ14527 1009 aaKnown RBP eCLIP8.18□□□□□ -1.1
C11orf54-207ENST00000528288 CFAP221Q4G0U5 840 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 SP8Q8IXZ3 490 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 CASKIN2Q8WXE0 1202 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 RUFY1Q96T51 708 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 GANQ9H2C0 597 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 VIPAS39Q9H9C1 493 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 KCNMB3Q9NPA1 279 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 FAM198AQ9UFP1 575 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 ARMCX3Q9UH62 379 aaPredicted RBP8.18□□□□□ -1.1
C11orf54-207ENST00000528288 DNM3Q9UQ16 869 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 MSH4O15457 936 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 RAD51CO43502 376 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 GFPT2O94808 682 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 ECE1P42892 770 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 NAB2Q15742 525 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 SLC18A3Q16572 532 aa8.18□□□□□ -1.1
C11orf54-207ENST00000528288 SEPT11Q9NVA2 429 aaKnown RBP8.18□□□□□ -1.1
C11orf54-207ENST00000528288 hCG_1984214I3L0E3 225 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 PJA2O43164 708 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 LRRN2O75325 713 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 NDUFB10O96000 172 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 UCHL3P15374 230 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 ABCB4P21439 1286 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 SPIRE1Q08AE8 756 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 PROM2Q8N271 834 aa8.17□□□□□ -1.1
C11orf54-207ENST00000528288 ZNF713Q8N859 430 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 U2AF1L4Q8WU68 220 aaKnown RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 BBXQ8WY36 941 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-207ENST00000528288 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms