RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 HIC1Q14526 733 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 SF3A1Q15459 793 aaKnown RBP18.74■□□□□ 0.59
SMCO4-204ENST00000527149 TRIM60Q495X7 471 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 ANKRD33Q7Z3H0 272 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 CTAGE1Q96RT6 745 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
SMCO4-204ENST00000527149 ZNF215Q9UL58 517 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-204ENST00000527149 MORC2Q9Y6X9 1032 aaPredicted RBP18.74■□□□□ 0.59
SMCO4-204ENST00000527149 KAT6AQ92794 2004 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 MARCH6O60337 910 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 BMP15O95972 392 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 PSAPP07602 524 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 NASPP49321 788 aaPredicted RBP18.73■□□□□ 0.59
SMCO4-204ENST00000527149 STAT5BP51692 787 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 PLCB4Q15147 1175 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 SWSAP1Q6NVH7 229 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 FAM126BQ8IXS8 530 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 GLG1Q92896 1179 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 ZNF302Q9NR11 478 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 ERAP1Q9NZ08 941 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 WRAP73Q9P2S5 460 aaPredicted RBP18.73■□□□□ 0.59
SMCO4-204ENST00000527149 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
SMCO4-204ENST00000527149 RANBP2P49792 3224 aaKnown RBP18.72■□□□□ 0.59
SMCO4-204ENST00000527149 BACH1O14867 736 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 STBD1O95210 358 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 MARK3P27448 753 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 SLC26A2P50443 739 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 TLE2Q04725 743 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 PTPN11Q06124 597 aaPredicted RBP18.72■□□□□ 0.59
SMCO4-204ENST00000527149 EPHA7Q15375 998 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 FAM160B1Q5W0V3 765 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 ARL6IP4Q66PJ3 421 aaKnown RBP18.72■□□□□ 0.59
SMCO4-204ENST00000527149 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 SEZ6LQ9BYH1 1024 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 AZI2Q9H6S1 392 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 GTF2IRD1Q9UHL9 959 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 SAMM50Q9Y512 469 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 TCHHQ07283 1943 aa18.72■□□□□ 0.59
SMCO4-204ENST00000527149 CD4P01730 458 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 SMIM10L2AP0DMW4 78 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 SMIM10L2BP0DMW5 78 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 TECP42680 631 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 ADAM17P78536 824 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 PRKCEQ02156 737 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 GDF6Q6KF10 455 aaPredicted RBP18.71■□□□□ 0.59
SMCO4-204ENST00000527149 PDXDC2PQ6P474 469 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 BANK1Q8NDB2 785 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 ATP8B4Q8TF62 1192 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 TOX2Q96NM4 488 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 HSD17B14Q9BPX1 270 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 HTATIP2Q9BUP3 242 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 ARID2Q68CP9 1835 aa18.71■□□□□ 0.59
SMCO4-204ENST00000527149 ZBTB42B2RXF5 422 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 B4GALT4O60513 344 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 PQBP1O60828 265 aaKnown RBP18.7■□□□□ 0.58
SMCO4-204ENST00000527149 GRIN1Q05586 938 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 EIF2AK1Q9BQI3 630 aaKnown RBP18.7■□□□□ 0.58
SMCO4-204ENST00000527149 TRPV6Q9H1D0 765 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
SMCO4-204ENST00000527149 RGL1Q9NZL6 768 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 MROH7Q68CQ1 1323 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 LTBP2Q14767 1821 aa18.7■□□□□ 0.58
SMCO4-204ENST00000527149 POTEB3A0JP26 581 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 PP2D1A8MPX8 630 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 P4HBP07237 508 aaKnown RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 SPATA31C1P0DKV0 1188 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 QARSP47897 775 aaKnown RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 CHMP4BP1P59074 171 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 FAAP100Q0VG06 881 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 SLC39A14Q15043 492 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 FOXD4L6Q3SYB3 417 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 FAM47CQ5HY64 1035 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 POTEBQ6S5H4 581 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 FOXD4L3Q6VB84 417 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 DTHD1Q6ZMT9 781 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 LINC00301Q8NCQ3 95 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 NEK9Q8TD19 979 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 ATP6V0A1Q93050 837 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 DYDC2Q96IM9 177 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 LXNQ9BS40 222 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 PDLIM7Q9NR12 457 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 FBXO2Q9UK22 296 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 TBX21Q9UL17 535 aa18.69■□□□□ 0.58
SMCO4-204ENST00000527149 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
SMCO4-204ENST00000527149 SLITRK3O94933 977 aa18.68■□□□□ 0.58
SMCO4-204ENST00000527149 OATP04181 439 aa18.68■□□□□ 0.58
SMCO4-204ENST00000527149 INSRRP14616 1297 aa18.68■□□□□ 0.58
SMCO4-204ENST00000527149 PSMC5P62195 406 aa18.68■□□□□ 0.58
SMCO4-204ENST00000527149 NUCB2P80303 420 aa18.68■□□□□ 0.58
SMCO4-204ENST00000527149 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms