RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 UBE3DQ7Z6J8 389 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 PRRT2Q7Z6L0 340 aaPredicted RBP6.77□□□□□ -1.33
SF3B2-205ENST00000526653 ATG4DQ86TL0 474 aaPredicted RBP6.77□□□□□ -1.33
SF3B2-205ENST00000526653 ZFPM1Q8IX07 1006 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 CCDC146Q8IYE0 955 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 FAM151AQ8WW52 585 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 OSBPL7Q9BZF2 842 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 PRDM5Q9NQX1 630 aaPredicted RBP6.77□□□□□ -1.33
SF3B2-205ENST00000526653 PICK1Q9NRD5 415 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 ATP11BQ9Y2G3 1177 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 AFG3L2Q9Y4W6 797 aa6.77□□□□□ -1.33
SF3B2-205ENST00000526653 DCDC2CA8MYV0 355 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 PEX10O60683 326 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 HDLBPQ00341 1268 aaKnown RBP6.76□□□□□ -1.33
SF3B2-205ENST00000526653 RING1Q06587 406 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 TREML2Q5T2D2 321 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 MAP3K21Q5TCX8 1036 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 FKBP1CQ5VVH2 108 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 CCDC84Q86UT8 332 aaPredicted RBP6.76□□□□□ -1.33
SF3B2-205ENST00000526653 C12orf40Q86WS4 652 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 VPS37DQ86XT2 251 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 LRRN4CLQ8ND94 238 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 FBF1Q8TES7 1133 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 ZDHHC15Q96MV8 337 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 CEP44Q9C0F1 390 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 SRCIN1Q9C0H9 1055 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 TNKS2Q9H2K2 1166 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 CNNM1Q9NRU3 951 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
SF3B2-205ENST00000526653 SLC45A1Q9Y2W3 748 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 NCOR1O75376 2440 aa6.76□□□□□ -1.33
SF3B2-205ENST00000526653 CDH23Q9H251 3354 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 CNGA1P29973 690 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 RTP1P59025 263 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 JAG1P78504 1218 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 GCKRQ14397 625 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 CCL14Q16627 93 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 FAM110CQ1W6H9 321 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 NOL9Q5SY16 702 aaKnown RBP6.75□□□□□ -1.33
SF3B2-205ENST00000526653 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 SCYL3Q8IZE3 742 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 RNPC3Q96LT9 517 aaKnown RBP6.75□□□□□ -1.33
SF3B2-205ENST00000526653 MRIQ9BWK5 157 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 PRDM12Q9H4Q4 367 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 USP40Q9NVE5 1235 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 THEGQ9P2T0 379 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 AGTPBP1Q9UPW5 1226 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 SAMM50Q9Y512 469 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 LRRFIP2Q9Y608 721 aaKnown RBP6.75□□□□□ -1.33
SF3B2-205ENST00000526653 PSME4Q14997 1843 aa6.75□□□□□ -1.33
SF3B2-205ENST00000526653 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 TRIM43BA6NCK2 446 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 GCLCP48506 637 aaPredicted RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 EPHB4P54760 987 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 FOXO4P98177 505 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 SPP2Q13103 211 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 CCDC57Q2TAC2 916 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 TMEM31Q5JXX7 168 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 GJC2Q5T442 439 aaPredicted RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 CDC42EP5Q6NZY7 148 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 LLGL2Q6P1M3 1020 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 LMBR1LQ6UX01 489 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 SLC39A5Q6ZMH5 540 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 CCAR1Q8IX12 1150 aaKnown RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 FAM168AQ92567 244 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 TRIM43Q96BQ3 446 aaPredicted RBP6.74□□□□□ -1.33
SF3B2-205ENST00000526653 PLA2G12BQ9BX93 195 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
SF3B2-205ENST00000526653 FAM86C2PA6NEL3 165 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 FANCGO15287 622 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 CASP7P55210 303 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 TFF2Q03403 129 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 UBE4AQ14139 1066 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 LRRC14Q15048 493 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ZNF648Q5T619 568 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ALG1LQ6GMV1 187 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 HHIPL2Q6UWX4 724 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ERICH6Q7L0X2 663 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 G2E3Q7L622 706 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 FBXO33Q7Z6M2 555 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 TBC1D22AQ8WUA7 517 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 TIFAQ96CG3 184 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 P2RX7Q99572 595 aaKnown RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 PUS3Q9BZE2 481 aaKnown RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ASCC2Q9H1I8 757 aaPredicted RBP6.73□□□□□ -1.33
SF3B2-205ENST00000526653 PCDHA4Q9UN74 947 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 ALPK3Q96L96 1907 aa6.73□□□□□ -1.33
SF3B2-205ENST00000526653 COL2A1P02458 1487 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms