RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MYOCDQ8IZQ8 938 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-210ENST00000525990 GDPD5Q8WTR4 605 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 TUBE1Q9UJT0 475 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 MTCH2Q9Y6C9 303 aa13.76□□□□□ -0.21
SSBP3-210ENST00000525990 NFASCO94856 1347 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 IGLV3-22A0A075B6J6 115 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 LINC01553A4QN01 128 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 KIF28PB7ZC32 967 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 MEIS1O00470 390 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 PRPF3O43395 683 aaKnown RBP13.75□□□□□ -0.21
SSBP3-210ENST00000525990 EDIL3O43854 480 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-210ENST00000525990 GHRP10912 638 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 GNAT1P11488 350 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 INSRRP14616 1297 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 MGAT3Q09327 533 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 GRB10Q13322 594 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 AP3B2Q13367 1082 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 RUFY3Q7L099 469 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 FBXL16Q8N461 479 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 ZMYND12Q9H0C1 365 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 VPS54Q9P1Q0 977 aa13.75□□□□□ -0.21
SSBP3-210ENST00000525990 SPTBN5Q9NRC6 3674 aaKnown RBP13.75□□□□□ -0.21
SSBP3-210ENST00000525990 CCDC196A0A1B0GTZ2 297 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 ESYT2A0FGR8 921 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 MBLAC1A4D2B0 266 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-210ENST00000525990 MAFGO15525 162 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 DHX15O43143 795 aaKnown RBP13.74□□□□□ -0.21
SSBP3-210ENST00000525990 UPP2O95045 317 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 NEFLP07196 543 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 ZNF76P36508 570 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 TFF2Q03403 129 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 TMEM62Q0P6H9 643 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 PLCB4Q15147 1175 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 FAM26DQ5JW98 314 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 CCDC60Q8IWA6 550 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-210ENST00000525990 SDF4Q9BRK5 362 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 C17orf80Q9BSJ5 609 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
SSBP3-210ENST00000525990 FAM49AQ9H0Q0 323 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-210ENST00000525990 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 CUL9Q8IWT3 2517 aa13.74□□□□□ -0.21
SSBP3-210ENST00000525990 CAND2O75155 1236 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 PSMA5P28066 241 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 EVCP57679 992 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 STK3Q13188 491 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 LPIN1Q14693 890 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
SSBP3-210ENST00000525990 SEPT8Q92599 483 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 AIFM3Q96NN9 605 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 RAD9AQ99638 391 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 RNF26Q9BY78 433 aaPredicted RBP13.73□□□□□ -0.21
SSBP3-210ENST00000525990 SUGCTQ9HAC7 445 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 CDY2AQ9Y6F7 541 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 TTC3P53804 2025 aa13.73□□□□□ -0.21
SSBP3-210ENST00000525990 IGKV6D-21A0A0A0MT36 114 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 EFCAB14O75071 495 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 ATG7O95352 703 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 AMHP03971 560 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 CYP3A4P08684 503 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 IFNAR1P17181 557 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 STAT5BP51692 787 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
SSBP3-210ENST00000525990 TJAP1Q5JTD0 557 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 ABHD15Q6UXT9 468 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 GJA10Q969M2 543 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 LENG9Q96B70 501 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 AGO3Q9H9G7 860 aaKnown RBP13.72□□□□□ -0.21
SSBP3-210ENST00000525990 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
SSBP3-210ENST00000525990 POTEB3A0JP26 581 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 IPO5O00410 1097 aaKnown RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 POU3F3P20264 500 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 ATP4AP20648 1035 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 KCNQ1P51787 676 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 ERVK-21P61565 698 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 MRPS6P82932 125 aaKnown RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 POTEBQ6S5H4 581 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 TRMT1LQ7Z2T5 733 aaKnown RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 RPAINQ86UA6 219 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 LINC01599Q8WXQ3 324 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 TOP1MTQ969P6 601 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 TGS1Q96RS0 853 aaKnown RBP13.71□□□□□ -0.21
SSBP3-210ENST00000525990 GLT8D2Q9H1C3 349 aa13.71□□□□□ -0.21
SSBP3-210ENST00000525990 FNDC1Q4ZHG4 1894 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms