RNA–Protein interactions for RNA: ENST00000524035.5

MEG3-222, Transcript of maternally expressed 3, human

TSL 2

Gene MEG3, Length 2,853 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEG3-222	ENST00000524035	TRIM59	Q8IWR1	403 aa		18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	CCDC170	Q8IYT3	715 aa		18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	PRPF38A	Q8NAV1	312 aa	Known RBP	18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	BAP1	Q92560	729 aa		18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	CCDC42	Q96M95	316 aa		18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	EIF3C	Q99613	913 aa	Known RBP	18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	HACL1	Q9UJ83	578 aa		18.93	■□□□□ 0.62
MEG3-222	ENST00000524035	TBCA	O75347	108 aa	Known RBP	18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	KNOP1	Q1ED39	458 aa	Known RBP	18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	RSRC2	Q7L4I2	434 aa	Known RBP	18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	CLEC4D	Q8WXI8	215 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	IKZF4	Q9H2S9	585 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	TUFT1	Q9NNX1	390 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	MYO1A	Q9UBC5	1043 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	FZD1	Q9UP38	647 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	ENC1	O14682	589 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	GCNT3	O95395	438 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	EIF4A3	P38919	411 aa	Known RBP	18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	HSD17B4	P51659	736 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	TNFAIP1	Q13829	316 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	CACNA2D4	Q7Z3S7	1137 aa		18.92	■□□□□ 0.62
MEG3-222	ENST00000524035	CETN3	O15182	167 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	WDR46	O15213	610 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	ITGB5	P18084	799 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	CDK17	Q00537	523 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	MTMR2	Q13614	643 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	MUM1L1	Q5H9M0	696 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	PRAMEF18	Q5VWM3	479 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	IQCD	Q96DY2	449 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	LSM14B	Q9BX40	385 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	CNOT7	Q9UIV1	285 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	IPO5	O00410	1097 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	NOL4	O94818	638 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	IPO7	O95373	1038 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	GNA14	O95837	355 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	HNRNPH3	P31942	346 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	EDRF1	Q3B7T1	1238 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	BANK1	Q8NDB2	785 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	MXRA8	Q9BRK3	442 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	WDR11	Q9BZH6	1224 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	DEFB129	Q9H1M3	183 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	FLOT1	O75955	427 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	MARS	P56192	900 aa	Known RBP	18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	PDXDC1	Q6P996	788 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	KIAA1683	Q9H0B3	1180 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	HDAC6	Q9UBN7	1215 aa		18.91	■□□□□ 0.62
MEG3-222	ENST00000524035	CLIC2	O15247	247 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	ZSCAN20	P17040	1043 aa	Predicted RBP	18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	NMT1	P30419	496 aa	Known RBP	18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	PPP4R3CP	Q6ZMV5	832 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	C1orf186	Q6ZWK4	172 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	SRGAP1	Q7Z6B7	1085 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	GOLGA1	Q92805	767 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	TEKT3	Q9BXF9	490 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	DDX41	Q9UJV9	622 aa	Known RBP	18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	FAM13A	O94988	1023 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	CHMP4BP1	P59074	171 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	KSR1	Q8IVT5	923 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	TEX2	Q8IWB9	1127 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	MYCT1	Q8N699	235 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	TRAF3IP3	Q9Y228	551 aa		18.9	■□□□□ 0.62
MEG3-222	ENST00000524035	MACROD2	A1Z1Q3	448 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	KRT86	O43790	486 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	CTNND1	O60716	968 aa	Known RBP	18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	KIF11	P52732	1056 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	POLR2F	P61218	127 aa	Known RBP	18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	SET	Q01105	290 aa	Predicted RBP	18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	KCNH2	Q12809	1159 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	LPAR1	Q92633	364 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	MTFR1L	Q9H019	292 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	DEF6	Q9H4E7	631 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	ASTN1	O14525	1302 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	VCAM1	P19320	739 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	RPS12	P25398	132 aa	Known RBP	18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	SPA17	Q15506	151 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	SLC38A10	Q9HBR0	1119 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	KCNH7	Q9NS40	1196 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	MYH11	P35749	1972 aa		18.89	■□□□□ 0.61
MEG3-222	ENST00000524035	CASP4	P49662	377 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	LXN	Q9BS40	222 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	MYO6	Q9UM54	1294 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	PDXK	O00764	312 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	CALU	O43852	315 aa	Predicted RBP	18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	ATP1A1	P05023	1023 aa	Known RBP	18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	EPS15	P42566	896 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	VAV2	P52735	878 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	AMPD2	Q01433	879 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	WNK4	Q96J92	1243 aa		18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	PURB	Q96QR8	312 aa	Known RBP	18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.88	■□□□□ 0.61
MEG3-222	ENST00000524035	RPTOR	Q8N122	1335 aa		18.87	■□□□□ 0.61
MEG3-222	ENST00000524035	AKR1B10	O60218	316 aa		18.87	■□□□□ 0.61
MEG3-222	ENST00000524035	AKAP3	O75969	853 aa		18.87	■□□□□ 0.61
MEG3-222	ENST00000524035	SPP2	Q13103	211 aa		18.87	■□□□□ 0.61
MEG3-222	ENST00000524035	EPHA7	Q15375	998 aa		18.87	■□□□□ 0.61
MEG3-222	ENST00000524035	B3GNT9	Q6UX72	402 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms