RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CCDC97Q96F63 343 aaPredicted RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 PURBQ96QR8 312 aaKnown RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 ZKSCAN3Q9BRR0 538 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 NACAP1Q9BZK3 213 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 VIPAS39Q9H9C1 493 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 LZTFL1Q9NQ48 299 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 VPS54Q9P1Q0 977 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 PUF60Q9UHX1 559 aaKnown RBP8.72□□□□□ -1.01
SPIDR-223ENST00000524033 SLC4A4Q9Y6R1 1079 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 MYPNQ86TC9 1320 aa8.72□□□□□ -1.01
SPIDR-223ENST00000524033 A0A1W2PQC6 194 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ERICH2A1L162 156 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 CTAGE15A4D2H0 777 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 LGALS16A8MUM7 142 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 EIF3JO75822 258 aaKnown RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 PRPF6O94906 941 aaKnown RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 PLEKHA8P1O95397 391 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 S1PR4O95977 384 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ABL1P00519 1130 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 CTAGE8P0CG41 777 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 GGCXP38435 758 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 AFMP43652 599 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 USP14P54578 494 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 HMGCS2P54868 508 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 HERVK_113P62684 666 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 UBXN2AP68543 259 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 PAK1Q13153 545 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 SEMA3FQ13275 785 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 CASP8Q14790 479 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 MTFR1Q15390 333 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 IL17AQ16552 155 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ZNF658Q5TYW1 1059 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 PAPD7Q5XG87 772 aaKnown RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 KLHL10Q6JEL2 608 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 SRLQ86TD4 932 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 CTAGE6Q86UF2 777 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 CTAGE4Q8IX94 777 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 SMYD4Q8IYR2 804 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ANKRD13CQ8N6S4 541 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 C4orf32Q8N8J7 132 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ENAHQ8N8S7 591 aaPredicted RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ZNF507Q8TCN5 953 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 ESR2Q92731 530 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 DNAJC7Q99615 494 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 RIOK1Q9BRS2 568 aaKnown RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 TTYH3Q9C0H2 523 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 RNF208Q9H0X6 261 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 AS3MTQ9HBK9 375 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 PDE11AQ9HCR9 933 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 MED4Q9NPJ6 270 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 SAP30BPQ9UHR5 308 aaKnown RBP8.71□□□□□ -1.02
SPIDR-223ENST00000524033 GABRQQ9UN88 632 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 FLT1P17948 1338 aa8.71□□□□□ -1.02
SPIDR-223ENST00000524033 TARSL2A2RTX5 802 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 KCNJ18B7U540 433 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 TNPO2O14787 897 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 KLRC4O43908 158 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 ORC4O43929 436 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 ADCY3O60266 1144 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 TFRCP02786 760 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 HLA-DOAP06340 250 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 ASNSP08243 561 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CALM1P0DP23 149 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CALM2P0DP24 149 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CALM3P0DP25 149 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CCL5P13501 91 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 XBP1P17861 261 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 GCLCP48506 637 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 LMAN1P49257 510 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 FLT3LGP49771 235 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 MMP16P51512 607 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 GYS2P54840 703 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 BACE1P56817 501 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 DYNLL1P63167 89 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 JAG1P78504 1218 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 TROAPQ12815 778 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 KCNJ12Q14500 433 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 KCNB1Q14721 858 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 TCP11X2Q5H9J9 407 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 ARL6IP4Q66PJ3 421 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 ZNF572Q7Z3I7 529 aaPredicted RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CERS3Q8IU89 383 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CMTR1Q8N1G2 835 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 MIGA1Q8NAN2 632 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 NOA1Q8NC60 698 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 NELFBQ8WX92 580 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 COA7Q96BR5 231 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 UBAC1Q9BSL1 405 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 WDR18Q9BV38 432 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 HAUS4Q9H6D7 363 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 TAB2Q9NYJ8 693 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 CWC15Q9P013 229 aaKnown RBP8.7□□□□□ -1.02
SPIDR-223ENST00000524033 MYO6Q9UM54 1294 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
SPIDR-223ENST00000524033 LRRIQ3A6PVS8 624 aaPredicted RBP8.69□□□□□ -1.02
SPIDR-223ENST00000524033 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
SPIDR-223ENST00000524033 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms