RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FAHP16930 419 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 CD40P25942 277 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 HERVK_113P62684 666 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 ZNF200P98182 395 aaPredicted RBP5.3□□□□□ -1.56
SKP1-212ENST00000523966 ADCY1Q08828 1119 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 BROXQ5VW32 411 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 TIGD7Q6NT04 549 aaPredicted RBP5.3□□□□□ -1.56
SKP1-212ENST00000523966 FAM126BQ8IXS8 530 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 ERCC4Q92889 916 aaPredicted RBP5.3□□□□□ -1.56
SKP1-212ENST00000523966 MTMR8Q96EF0 704 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 LIN37Q96GY3 246 aaPredicted RBP5.3□□□□□ -1.56
SKP1-212ENST00000523966 BCAS3Q9H6U6 928 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 HCFC2Q9Y5Z7 792 aa5.3□□□□□ -1.56
SKP1-212ENST00000523966 WASHC2AQ641Q2 1341 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 WASHC2CQ9Y4E1 1318 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 LRRC10BA6NIK2 292 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 PEX10O60683 326 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 KATNA1O75449 491 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 PAPLNO95428 1278 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 C4BPAP04003 597 aaKnown RBP5.29□□□□□ -1.56
SKP1-212ENST00000523966 ENO2P09104 434 aaPredicted RBP5.29□□□□□ -1.56
SKP1-212ENST00000523966 ITGB5P18084 799 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 SDHAP31040 664 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 FNTBP49356 437 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 MLANAQ16655 118 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
SKP1-212ENST00000523966 GPR158Q5T848 1215 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 VASNQ6EMK4 673 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 LHFPL2Q6ZUX7 228 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 Q8N3U1 123 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 CNTD1Q8N815 330 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 AHCYL2Q96HN2 611 aaKnown RBP5.29□□□□□ -1.56
SKP1-212ENST00000523966 GBP4Q96PP9 640 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 PDGFDQ9GZP0 370 aaPredicted RBP5.29□□□□□ -1.56
SKP1-212ENST00000523966 RNF38Q9H0F5 515 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 TELO2Q9Y4R8 837 aa5.29□□□□□ -1.56
SKP1-212ENST00000523966 ZNF503-AS2A6NEH8 195 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 STAT5AP42229 794 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 PHC1P78364 1004 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 EPHA7Q15375 998 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 TERF2Q15554 542 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 TEPPQ6URK8 271 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 FRMD7Q6ZUT3 714 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 RASSF3Q86WH2 238 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 MIB1Q86YT6 1006 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 ZNF610Q8N9Z0 462 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 COG1Q8WTW3 980 aa5.28□□□□□ -1.56
SKP1-212ENST00000523966 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 GOLGA8BA8MQT2 603 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 ACOT7O00154 380 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 DVL2O14641 736 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 MAFGO15525 162 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 TGM5O43548 720 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 PRKD3O94806 890 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 ASGR2P07307 311 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 MMEP08473 750 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 CYP2C8P10632 490 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 YBX3P16989 372 aaKnown RBP eCLIP5.27□□□□□ -1.571e-12■■□□□ 13.5
SKP1-212ENST00000523966 CCND1P24385 295 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 PTX3P26022 381 aaPredicted RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 SMAD3P84022 425 aaKnown RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 CACNB2Q08289 660 aaPredicted RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 DBPQ10586 325 aaPredicted RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 LRRC32Q14392 662 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 SEC23AQ15436 765 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 SMAD2Q15796 467 aaKnown RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 PLEKHG6Q3KR16 790 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 ODR4Q5SWX8 454 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 CREB3L3Q68CJ9 461 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 PRR23BQ6ZRT6 265 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 LDHDQ86WU2 507 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 AMOTL1Q8IY63 956 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 C7orf31Q8N865 590 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 FBXO15Q8NCQ5 510 aaPredicted RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 CALML6Q8TD86 181 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 CPA5Q8WXQ8 436 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 KCNN1Q92952 543 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 TUBGCP5Q96RT8 1024 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 SMAD5Q99717 465 aaKnown RBP5.27□□□□□ -1.57
SKP1-212ENST00000523966 MENTQ9BUN1 341 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 SPEF1Q9Y4P9 236 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 ASB1Q9Y576 335 aa5.27□□□□□ -1.57
SKP1-212ENST00000523966 TEX51A0A1B0GUA7 166 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.26□□□□□ -1.57
SKP1-212ENST00000523966 UBA6A0AVT1 1052 aaPredicted RBP5.26□□□□□ -1.57
SKP1-212ENST00000523966 PRAMEF22A3QJZ6 481 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 KDM1AO60341 852 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 SEMA7AO75326 666 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 APOL3O95236 402 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 LRG1P02750 347 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 TAL1P17542 331 aaPredicted RBP5.26□□□□□ -1.57
SKP1-212ENST00000523966 MTMR1Q13613 665 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 TTC38Q5R3I4 469 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 CATSPEREQ5SY80 951 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 SYDE2Q5VT97 1194 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 PRAMEF18Q5VWM3 479 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 FSTL4Q6MZW2 842 aa5.26□□□□□ -1.57
SKP1-212ENST00000523966 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms