RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 BRCA2P51587 3418 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 ZSWIM8A7E2V4 1837 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 UTYO14607 1347 aa6.5□□□□□ -1.37
CTNNA1-239ENST00000523685 HTR3BO95264 441 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 GDF11O95390 407 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 PGRP06401 933 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 FGRP09769 529 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 IMPDH2P12268 514 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 ATP2B1P20020 1258 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 FGFR2P21802 821 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 NTF4P34130 210 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 GATA4P43694 442 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 UBXN2AP68543 259 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 PICALMQ13492 652 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 ATP2B3Q16720 1220 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 MCF2L2Q86YR7 1114 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 TMEM151AQ8N4L1 468 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 KCT2Q8NC54 265 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 CPLX3Q8WVH0 158 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 UTP4Q969X6 686 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 FERD3LQ96RJ6 166 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 YIPF2Q9BWQ6 316 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 USP44Q9H0E7 712 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 SSU72Q9NP77 194 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 GNL3LQ9NVN8 582 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 ADAM30Q9UKF2 790 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 PPT2Q9UMR5 302 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 GABRQQ9UN88 632 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 ZHX2Q9Y6X8 837 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 TRIOBPQ9H2D6 2365 aa6.49□□□□□ -1.37
CTNNA1-239ENST00000523685 ARAP2Q8WZ64 1704 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 RPAP1Q9BWH6 1393 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 CEP290O15078 2479 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 TRIM75PA6NK02 468 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 CXCL11O14625 94 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ADCY3O60266 1144 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 FARP2O94887 1054 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 TFRCP02786 760 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 SSBP05455 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 GJB1P08034 283 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 BMP3P12645 472 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 PHKA1P46020 1223 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 RGS3P49796 1198 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 MOGSQ13724 837 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 TMEM201Q5SNT2 666 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 FBXW10Q5XX13 1052 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 GPAT2Q6NUI2 795 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 HID1Q8IV36 788 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ARMC10Q8N2F6 343 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 SMCR8Q8TEV9 937 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 U2AF1L4Q8WU68 220 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ISL2Q96A47 359 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 CRBNQ96SW2 442 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 HTATIP2Q9BUP3 242 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 SSBP4Q9BWG4 385 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ACSS3Q9H6R3 686 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 REV1Q9UBZ9 1251 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ABCF2Q9UG63 623 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ZNF112Q9UJU3 913 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 PCOLCE2Q9UKZ9 415 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 NR2E3Q9Y5X4 410 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 LRRFIP2Q9Y608 721 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 RBBP6Q7Z6E9 1792 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 PTPRCP08575 1304 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 KIF16BQ96L93 1317 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 ADGRA2Q96PE1 1338 aa6.48□□□□□ -1.37
CTNNA1-239ENST00000523685 LAMB1P07942 1786 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 TNPO2O14787 897 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 UBTFL1P0CB47 393 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 RAB6AP20340 208 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 ADORA1P30542 326 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 RFX5P48382 616 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 FLT3LGP49771 235 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 LRRFIP1Q32MZ4 808 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 SGO2Q562F6 1265 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 NOL9Q5SY16 702 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 CCDC81Q6ZN84 652 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 FASTKD5Q7L8L6 764 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 ATG9AQ7Z3C6 839 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 DZIP1Q86YF9 867 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 FAM20CQ8IXL6 584 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 SCYL3Q8IZE3 742 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 DEFB118Q96PH6 123 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 SMC4Q9NTJ3 1288 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 DENND2AQ9ULE3 1009 aa6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 PA2G4Q9UQ80 394 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-239ENST00000523685 CACNA1FO60840 1977 aa6.46□□□□□ -1.37
CTNNA1-239ENST00000523685 A0A0G2JLL6 359 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 DDTLA6NHG4 134 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-239ENST00000523685 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms