RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 FDX2Q6P4F2 183 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 FMR1NBQ8N0W7 255 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-215ENST00000521798 CPA6Q8N4T0 437 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 CHST14Q8NCH0 376 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 FRS2Q8WU20 508 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 AHCYL2Q96HN2 611 aaKnown RBP8.87□□□□□ -0.99
SPIDR-215ENST00000521798 MCMBPQ9BTE3 642 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 VTA1Q9NP79 307 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 SPTLC3Q9NUV7 552 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 GIT1Q9Y2X7 761 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 COQ6Q9Y2Z9 468 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 RGPD1P0DJD0 1748 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 SHANK3Q9BYB0 1731 aa8.87□□□□□ -0.99
SPIDR-215ENST00000521798 COL3A1P02461 1466 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-215ENST00000521798 PARD3Q8TEW0 1356 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 MEFVO15553 781 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-215ENST00000521798 OIP5O43482 229 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 VSIG8P0DPA2 414 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 PF4V1P10720 104 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 PPP2R1AP30153 589 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 KRT85P78386 507 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 TRAPPC3LQ5T215 181 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.86□□□□□ -0.99
SPIDR-215ENST00000521798 TMC3Q7Z5M5 1100 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 USP33Q8TEY7 942 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 CHTF18Q8WVB6 975 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 SARGQ9BW04 601 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 ACSS3Q9H6R3 686 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-215ENST00000521798 KDRP35968 1356 aa8.86□□□□□ -0.99
SPIDR-215ENST00000521798 SBF2Q86WG5 1849 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 A0A0A0MRY4 1105 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-215ENST00000521798 SHISA8B8ZZ34 492 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 STXBP3O00186 592 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 CYP27B1O15528 508 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 LRRN2O75325 713 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 ATP2A2P16615 1042 aaKnown RBP8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PAX3P23760 479 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 KPNA1P52294 538 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-215ENST00000521798 SESN3P58005 492 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PAK1Q13153 545 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 RALBP1Q15311 655 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 ANKRD34AQ69YU3 496 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 CLRN3Q8NCR9 226 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PCDH19Q8TAB3 1148 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 ALG1Q9BT22 464 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
SPIDR-215ENST00000521798 BACE2Q9Y5Z0 518 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PLEKHG2Q9H7P9 1386 aa8.85□□□□□ -0.99
SPIDR-215ENST00000521798 PCDH11XQ9BZA7 1347 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 PCDH11YQ9BZA8 1340 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 AURKAO14965 403 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 PRAMEF1O95521 474 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 GSNP06396 782 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 CYP2C19P33261 490 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 GRIK1P39086 918 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 RAC1P63000 192 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 MORC3Q14149 939 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 GBX1Q14549 363 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 PCBP2Q15366 365 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPIDR-215ENST00000521798 EZH2Q15910 746 aaKnown RBP8.84□□□□□ -0.99
SPIDR-215ENST00000521798 E4F1Q66K89 784 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-215ENST00000521798 SULT6B1Q6IMI4 303 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 LBX2Q6XYB7 198 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 C11orf96Q7Z7L8 435 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 C1orf162Q8NEQ5 155 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-215ENST00000521798 TIFAQ96CG3 184 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 CLIP3Q96DZ5 547 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
SPIDR-215ENST00000521798 PRDM10Q9NQV6 1147 aa8.84□□□□□ -0.99
SPIDR-215ENST00000521798 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 H3BM21 787 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 WNT9AO14904 365 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 MSCO60682 206 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 CD3EP07766 207 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 IFIT2P09913 472 aaKnown RBP8.83□□□□□ -1
SPIDR-215ENST00000521798 NBPF7P0C2Y1 421 aaPredicted RBP8.83□□□□□ -1
SPIDR-215ENST00000521798 RBP3P10745 1247 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 RAB6AP20340 208 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 CYP7A1P22680 504 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 AMPD1P23109 780 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 LTBRP36941 435 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 GTF2H3Q13889 308 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 ZRSR2Q15696 482 aaKnown RBP8.83□□□□□ -1
SPIDR-215ENST00000521798 C10orf62Q5T681 223 aaPredicted RBP8.83□□□□□ -1
SPIDR-215ENST00000521798 EPM2AIP1Q7L775 607 aaPredicted RBP8.83□□□□□ -1
SPIDR-215ENST00000521798 PJA1Q8NG27 643 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 SLC5A5Q92911 643 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 FAXDC2Q96IV6 333 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 GPRC5CQ9NQ84 441 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 USP25Q9UHP3 1055 aa8.83□□□□□ -1
SPIDR-215ENST00000521798 TMEFF2Q9UIK5 374 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms