RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 OGFRQ9NZT2 677 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.54■□□□□ 0.08
SPIDR-214ENST00000521550 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 V9GYY5 206 aaPredicted RBP15.54■□□□□ 0.08
SPIDR-214ENST00000521550 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 E9PMD0 336 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 POTEB2H3BUK9 544 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 IGF2BP3O00425 579 aaKnown RBP eCLIP15.54■□□□□ 0.08
SPIDR-214ENST00000521550 TADA3O75528 432 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 ASNSP08243 561 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 SPA17Q15506 151 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 MIIPQ5JXC2 388 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 MIGA2Q7L4E1 593 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 GPR161Q8N6U8 529 aaKnown RBP15.54■□□□□ 0.08
SPIDR-214ENST00000521550 HPS3Q969F9 1004 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 POLR3CQ9BUI4 534 aaPredicted RBP15.54■□□□□ 0.08
SPIDR-214ENST00000521550 TANGO6Q9C0B7 1094 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 VCPKMTQ9H867 229 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 GINM1Q9NU53 330 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 FAM184BQ9ULE4 1060 aa15.54■□□□□ 0.08
SPIDR-214ENST00000521550 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 NAA30Q147X3 362 aaPredicted RBP15.53■□□□□ 0.08
SPIDR-214ENST00000521550 ECM1Q16610 540 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 ACRBPQ8NEB7 543 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 NEK11Q8NG66 645 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 CNKSR2Q8WXI2 1034 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 OTUD5Q96G74 571 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 ZNF341Q9BYN7 854 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 TTYH3Q9C0H2 523 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 R3HDMLQ9H3Y0 253 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 CDC23Q9UJX2 597 aa15.53■□□□□ 0.08
SPIDR-214ENST00000521550 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 EIF3CLB5ME19 914 aaKnown RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 USO1O60763 962 aaKnown RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 CYP11B2P19099 503 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 MUTP22033 750 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 SNAP25P60880 206 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 CATSPER3Q86XQ3 398 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 SYT2Q8N9I0 419 aaPredicted RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 RABGGTAQ92696 567 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 CCDC42Q96M95 316 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 EIF3CQ99613 913 aaKnown RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 RANBP17Q9H2T7 1088 aaKnown RBP15.52■□□□□ 0.08
SPIDR-214ENST00000521550 ZHX3Q9H4I2 956 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 EMILIN3Q9NT22 766 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 PNMA2Q9UL42 364 aa15.52■□□□□ 0.08
SPIDR-214ENST00000521550 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 CETN3O15182 167 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 FKTNO75072 461 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 TBCAO75347 108 aaKnown RBP15.52■□□□□ 0.07
SPIDR-214ENST00000521550 MED24O75448 989 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 CFBP00751 764 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 CAP2P40123 477 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 GTF2A2P52657 109 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 SLC12A3P55017 1021 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.07
SPIDR-214ENST00000521550 WHAMMP3Q1A5X7 153 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 ERO1BQ86YB8 467 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 MS4A4AQ96JQ5 239 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 CHP1Q99653 195 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 TUFT1Q9NNX1 390 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.07
SPIDR-214ENST00000521550 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 RNF225M0QZC1 329 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 MSH4O15457 936 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 CALUO43852 315 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 TUBBP07437 444 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 GAP43P17677 238 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 HOXA13P31271 388 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 LRRC41Q15345 812 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 CCDC122Q5T0U0 273 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 TMCO3Q6UWJ1 677 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 LRRC55Q6ZSA7 311 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 SRGAP1Q7Z6B7 1085 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 PTPN18Q99952 460 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 DEF6Q9H4E7 631 aa15.51■□□□□ 0.07
SPIDR-214ENST00000521550 NHEJ1Q9H9Q4 299 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
SPIDR-214ENST00000521550 CCL15-CCL14A0A0B4J2E2 113 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 EYA4O95677 639 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 H2AFXP16104 143 aaPredicted RBP15.5■□□□□ 0.07
SPIDR-214ENST00000521550 RPL13P26373 211 aaKnown RBP15.5■□□□□ 0.07
SPIDR-214ENST00000521550 HNRNPH3P31942 346 aaKnown RBP15.5■□□□□ 0.07
SPIDR-214ENST00000521550 STAT3P40763 770 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 JAG1P78504 1218 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 SPIRE1Q08AE8 756 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 KIF5AQ12840 1032 aa15.5■□□□□ 0.07
SPIDR-214ENST00000521550 RRP1BQ14684 758 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms