RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
CLK4-206ENST00000520878 LAMB2P55268 1798 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 ERICH4A6NGS2 130 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 EPHB6O15197 1021 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 PAFAH1B1P43034 410 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
CLK4-206ENST00000520878 CASP5P51878 434 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 EXOC3L4Q17RC7 722 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 KNOP1Q1ED39 458 aaKnown RBP12.49□□□□□ -0.41
CLK4-206ENST00000520878 HSP90B2PQ58FF3 399 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
CLK4-206ENST00000520878 LACRTQ9GZZ8 138 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 PARVGQ9HBI0 331 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 K7ENM7 598 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 PHACTR2O75167 634 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 TADA3O75528 432 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 KCNA1Q09470 495 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 XKR9Q5GH70 373 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 LXNQ9BS40 222 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 IKZF4Q9H2S9 585 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 ASTN2O75129 1339 aaPredicted RBP12.49□□□□□ -0.41
CLK4-206ENST00000520878 GNA14O95837 355 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 KRT13P13646 458 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 PRELPP51888 382 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 HMGCS2P54868 508 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 AGBL3Q8NEM8 1001 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 ZNF507Q8TCN5 953 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 RPAP3Q9H6T3 665 aaPredicted RBP12.49□□□□□ -0.41
CLK4-206ENST00000520878 KCNMB3Q9NPA1 279 aa12.49□□□□□ -0.41
CLK4-206ENST00000520878 SRCAPQ6ZRS2 3230 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 EDIL3O43854 480 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 GIT2Q14161 759 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 GPR161Q8N6U8 529 aaKnown RBP12.48□□□□□ -0.41
CLK4-206ENST00000520878 TAF4BQ92750 862 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 BICD1Q96G01 975 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 PURBQ96QR8 312 aaKnown RBP12.48□□□□□ -0.41
CLK4-206ENST00000520878 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 NR3C1P04150 777 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 NOVP48745 357 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 MYH15Q9Y2K3 1946 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 ATP1A1P05023 1023 aaKnown RBP12.48□□□□□ -0.41
CLK4-206ENST00000520878 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
CLK4-206ENST00000520878 NLRX1Q86UT6 975 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 PSMD1Q99460 953 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 MYH1P12882 1939 aa12.48□□□□□ -0.41
CLK4-206ENST00000520878 RREB1Q92766 1687 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 SLC9A1P19634 815 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 CASP4P49662 377 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 MTMR1Q13613 665 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 MIIPQ5JXC2 388 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 RNF207Q6ZRF8 634 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 FAM186BQ8IYM0 893 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 SYT2Q8N9I0 419 aaPredicted RBP12.47□□□□□ -0.41
CLK4-206ENST00000520878 MTMR8Q96EF0 704 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 EYA4O95677 639 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
CLK4-206ENST00000520878 PRPF4BQ13523 1007 aaKnown RBP12.47□□□□□ -0.41
CLK4-206ENST00000520878 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 DNAAF5Q86Y56 855 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 TXLNBQ8N3L3 684 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 TBX3O15119 743 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 ZNF185O15231 689 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 ARSHQ5FYA8 562 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 RINT1Q6NUQ1 792 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 CCDC170Q8IYT3 715 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 ERGIC2Q96RQ1 377 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 KCND1Q9NSA2 647 aa12.47□□□□□ -0.41
CLK4-206ENST00000520878 LARSQ9P2J5 1176 aaKnown RBP12.47□□□□□ -0.41
CLK4-206ENST00000520878 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 FANCGO15287 622 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 TRIM49P0CI25 452 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 TRIM49CP0CI26 452 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 VAV2P52735 878 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
CLK4-206ENST00000520878 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 ATG4CQ96DT6 458 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 DNAJC7Q99615 494 aa12.46□□□□□ -0.41
CLK4-206ENST00000520878 UNC45AQ9H3U1 944 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms