RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 INO80BQ9C086 356 aaPredicted RBP8.53□□□□□ -1.04
CLK4-202ENST00000519132 DDX21Q9NR30 783 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLK4-202ENST00000519132 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 POLHQ9Y253 713 aa8.53□□□□□ -1.04
CLK4-202ENST00000519132 FLT4P35916 1363 aa8.52□□□□□ -1.04
CLK4-202ENST00000519132 PTPDC1A2A3K4 754 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 KIF20AO95235 890 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 CYP11A1P05108 521 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 SARSP49591 514 aaKnown RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 SATB1Q01826 763 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 TTLL4Q14679 1199 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 ZKSCAN8Q15776 578 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 ZNF280DQ6N043 979 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 PPP1R13LQ8WUF5 828 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 KCTD13Q8WZ19 329 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 RUNDC1Q96C34 613 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 TBCBQ99426 244 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 KLHL11Q9NVR0 708 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 KLRG2A4D1S0 409 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 GAS7O60861 476 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 AOC2O75106 756 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 NPTXRO95502 500 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 CABP4P57796 275 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 ZNF280AP59817 542 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 GPSM2P81274 684 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 DMTNQ08495 405 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 HLTFQ14527 1009 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLK4-202ENST00000519132 GRIK5Q16478 980 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 NBPF12Q5TAG4 269 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 GET4Q7L5D6 327 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 KREMEN2Q8NCW0 462 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 RIN2Q8WYP3 895 aaPredicted RBP8.52□□□□□ -1.05
CLK4-202ENST00000519132 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 WHRNQ9P202 907 aa8.52□□□□□ -1.05
CLK4-202ENST00000519132 FSCN2O14926 492 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 CTNND1O60716 968 aaKnown RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 CKMP06732 381 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 RHCEP18577 417 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 YARSP54577 528 aaKnown RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 RHDQ02161 417 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 SUGP1Q8IWZ8 645 aaKnown RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 ARHGEF39Q8N4T4 335 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 PPM1NQ8N819 430 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 CCDC74BQ96LY2 380 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 FBXL7Q9UJT9 491 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 ADAMTS8Q9UP79 889 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 COL18A1P39060 1754 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 ZBED9Q6R2W3 1325 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 ABHD14A-ACY1A0A1B0GW23 586 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 SLC9A1P19634 815 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 CYP2C19P33261 490 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 DNM2P50570 870 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 NOL9Q5SY16 702 aaKnown RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 GPR158Q5T848 1215 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 ZNF468Q5VIY5 522 aaPredicted RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 TOGARAM2Q6ZUX3 1019 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 NKX2-4Q9H2Z4 354 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 TCF7L1Q9HCS4 588 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 NUDCQ9Y266 331 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 COL16A1Q07092 1604 aaPredicted RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 MAP3K19Q56UN5 1328 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 H0Y8X5 98 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 GRAMD1CQ8IYS0 662 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 IFNL2Q8IZJ0 200 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 VPS45Q9NRW7 570 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 SWAP70Q9UH65 585 aa8.51□□□□□ -1.05
CLK4-202ENST00000519132 FAM208AQ9UK61 1670 aaKnown RBP8.51□□□□□ -1.05
CLK4-202ENST00000519132 CAMTA1Q9Y6Y1 1673 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 THBDP07204 575 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 SCARF1Q14162 830 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 STYK1Q6J9G0 422 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 TMC3Q7Z5M5 1100 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 GFOD1Q9NXC2 390 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 EFCAB14O75071 495 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 HNRNPUQ00839 825 aaKnown RBP eCLIP8.5□□□□□ -1.05
CLK4-202ENST00000519132 RRS1Q15050 365 aaKnown RBP8.5□□□□□ -1.05
CLK4-202ENST00000519132 TMEM177Q53S58 311 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 PCDH19Q8TAB3 1148 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 JADE3Q92613 823 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 JPH1Q9HDC5 661 aaPredicted RBP8.5□□□□□ -1.05
CLK4-202ENST00000519132 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
CLK4-202ENST00000519132 ATXN7L1Q9ULK2 861 aaPredicted RBP8.5□□□□□ -1.05
CLK4-202ENST00000519132 INVSQ9Y283 1065 aa8.5□□□□□ -1.05
CLK4-202ENST00000519132 CDC14CA4D256 554 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 TOM1O60784 492 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 FBLN1P23142 703 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 IL13P35225 146 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 ZNF143P52747 638 aaPredicted RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
CLK4-202ENST00000519132 FAM186BQ8IYM0 893 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 CXorf38Q8TB03 319 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 SLC13A1Q9BZW2 595 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 BHMT2Q9H2M3 363 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms