RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 SMIM23A6NLE4 172 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 LAD1O00515 517 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 FGFR1OPO95684 399 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 SHBGP04278 402 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 ACTN1P12814 892 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 SLC8A1P32418 973 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 IFFO1Q0D2I5 559 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 FAM133BQ5BKY9 247 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 AGBL2Q5U5Z8 902 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 LRCH2Q5VUJ6 765 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 TMC3Q7Z5M5 1100 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 ADAT2Q7Z6V5 191 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 NELFCDQ8IXH7 590 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 C3orf20Q8ND61 904 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 NSMCE1Q8WV22 266 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 DDX12PQ92771 950 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 CHMP6Q96FZ7 201 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 UIMC1Q96RL1 719 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 PSMD1Q99460 953 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 KDM4CQ9H3R0 1056 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 LUC7LQ9NQ29 371 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 BIN2Q9UBW5 565 aaPredicted RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 NOC2LQ9Y3T9 749 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 TLDC2A0PJX2 215 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 POTEMA6NI47 508 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 F8VZ95 297 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 DNAJC8O75937 253 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 COPB2P35606 906 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 PDE6BP35913 854 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 PTK2Q05397 1052 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 LARP4BQ92615 738 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 CUL5Q93034 780 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 XPO6Q96QU8 1125 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 TRIM51Q9BSJ1 452 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 TRIM6Q9C030 488 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 TMEM260Q9NX78 707 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 NR2E1Q9Y466 385 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 COL4A3BPQ9Y5P4 624 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 CACNA1SQ13698 1873 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 CNTNAP4Q9C0A0 1308 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 SMCO2A6NFE2 343 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 BUB1BO60566 1050 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 PAEPP09466 180 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 CHN1P15882 459 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 USP11P51784 963 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 NAPAP54920 295 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 SATB1Q01826 763 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 MECOMQ03112 1051 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 LRRC63Q05C16 580 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 COBLL1Q53SF7 1204 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 FAM182BQ5T319 152 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 ERMARDQ5T6L9 678 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCDC197Q8NCU1 140 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 TBCKQ8TEA7 893 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 GJA10Q969M2 543 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 SELENOSQ9BQE4 189 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 EDEM3Q9BZQ6 932 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 BSDC1Q9NW68 430 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 MCM9Q9NXL9 1143 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 SRP68Q9UHB9 627 aaKnown RBP10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 MINPP1Q9UNW1 487 aa10.67□□□□□ -0.7
ARFGEF1-203ENST00000518230 PGRMC1O00264 195 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 PCP11498 1178 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCNHP51946 323 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ZNF571Q7Z3V5 609 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCDC63Q8NA47 563 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 UHMK1Q8TAS1 419 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CELF1Q92879 486 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 TSG101Q99816 390 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 PANK4Q9NVE7 773 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 STX8Q9UNK0 236 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ZNF804BA4D1E1 1349 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ANP32DO95626 131 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CACNB1Q02641 598 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ASIC2Q16515 512 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 UBAP2Q5T6F2 1119 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 NEK8Q86SG6 692 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 LRRC34Q8IZ02 419 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ACTRT1Q8TDG2 376 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 NSUN4Q96CB9 384 aaKnown RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 ZNF317Q96PQ6 595 aaPredicted RBP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 TAF1P21675 1872 aa10.66□□□□□ -0.7
ARFGEF1-203ENST00000518230 PVALEFA0A1B0GWK0 134 aa10.65□□□□□ -0.7
ARFGEF1-203ENST00000518230 RPS6KA4O75676 772 aa10.65□□□□□ -0.7
ARFGEF1-203ENST00000518230 MMEP08473 750 aa10.65□□□□□ -0.7
ARFGEF1-203ENST00000518230 KLRK1P26718 216 aa10.65□□□□□ -0.7
ARFGEF1-203ENST00000518230 FKBP3Q00688 224 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms