RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ZNF574Q6ZN55 896 aaPredicted RBP4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 MIB1Q86YT6 1006 aa4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 CHPFQ8IZ52 775 aa4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 C1orf162Q8NEQ5 155 aaPredicted RBP4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 YIPF4Q9BSR8 244 aa4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 KCNG1Q9UIX4 513 aa4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 NOC2LQ9Y3T9 749 aaKnown RBP4.41□□□□□ -1.7
RNU6-390P-201ENST00000516259 GOLGA6CA6NDK9 693 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA6BA6NDN3 693 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FAM90A27PA6NNH2 459 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FOXP2O15409 715 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 MPOP05164 745 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 RNASE1P07998 156 aaKnown RBP4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA6DP0CG33 693 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FAHP16930 419 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 SLC9A1P19634 815 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 MAPKAPK2P49137 400 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 YBX1P67809 324 aaKnown RBP4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 TUSC3Q13454 348 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GTF2H3Q13889 308 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 PLCL1Q15111 1095 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 SEC23AQ15436 765 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FSCN1Q16658 493 aaKnown RBP4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 CATSPEREQ5SY80 951 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 BTBD8Q5XKL5 378 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 BICRALQ6AI39 1079 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 HDGFL2Q7Z4V5 671 aaPredicted RBP4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FBXO41Q8TF61 875 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 HOOK2Q96ED9 719 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 FAXDC2Q96IV6 333 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 TOMM22Q9NS69 142 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA6AQ9NYA3 693 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZIM2Q9NZV7 527 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 H2AFY2Q9P0M6 372 aaPredicted RBP4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 PALD1Q9ULE6 856 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 ANKRD6Q9Y2G4 727 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GIT1Q9Y2X7 761 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 TELO2Q9Y4R8 837 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
RNU6-390P-201ENST00000516259 GOLGA6L22H0YM25 854 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 SCDO00767 359 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 SLC27A2O14975 620 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 MAFGO15525 162 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 PRC1O43663 620 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 EFEMP2O95967 443 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 MTHFD2P13995 350 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 GPR3P46089 330 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 TBX4P57082 545 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 PAN2Q504Q3 1202 aaKnown RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 OLFML2BQ68BL8 750 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 ESRP1Q6NXG1 681 aaKnown RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 ATG4DQ86TL0 474 aaPredicted RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 IRF2BP1Q8IU81 584 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 PHYKPLQ8IUZ5 450 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CCAR1Q8IX12 1150 aaKnown RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 FAM126BQ8IXS8 530 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 MYO1HQ8N1T3 1032 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CPA6Q8N4T0 437 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 MAGEB6Q8N7X4 407 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CLEC4DQ8WXI8 215 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CPA5Q8WXQ8 436 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 AIFM3Q96NN9 605 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 FOXB1Q99853 325 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 RTFDC1Q9BY42 306 aaPredicted RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 RHOBTB2Q9BYZ6 727 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CD244Q9BZW8 370 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 SLC6A17Q9H1V8 727 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 VTA1Q9NP79 307 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 LUC7LQ9NQ29 371 aaKnown RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF277Q9NRM2 450 aaPredicted RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 AASDHPPTQ9NRN7 309 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 TOPORSQ9NS56 1045 aaPredicted RBP4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 C14orf119Q9NWQ9 140 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 ADAMTS6Q9UKP5 1117 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 WASF3Q9UPY6 502 aa4.39□□□□□ -1.71
RNU6-390P-201ENST00000516259 CCDC194A0A1B0GVG4 234 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ACOT7O00154 380 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZSCAN20P17040 1043 aaPredicted RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ENPP1P22413 925 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 AKAP5P24588 427 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 TACR1P25103 407 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 AOAHP28039 575 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 MRPS9P82933 396 aaKnown RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 DBPQ10586 325 aaPredicted RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 LRP8Q14114 963 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 PTPN21Q16825 1174 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ANO4Q32M45 955 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ZNF792Q3KQV3 632 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 TIGD5Q53EQ6 642 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 CCDC178Q5BJE1 867 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 FSTL4Q6MZW2 842 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 ESPNLQ6ZVH7 1005 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 KANSL1Q7Z3B3 1105 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 MILR1Q7Z6M3 343 aa4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 RTN4RL1Q86UN2 441 aaPredicted RBP4.38□□□□□ -1.71
RNU6-390P-201ENST00000516259 AMOTL1Q8IY63 956 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms