RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RPAINQ86UA6 219 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 IL27Q8NEV9 243 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 IFIH1Q9BYX4 1025 aaKnown RBP15.55■□□□□ 0.08
TCOF1-215ENST00000515516 THEGQ9P2T0 379 aa15.55■□□□□ 0.08
TCOF1-215ENST00000515516 DDX39AO00148 427 aaKnown RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 CYP3A4P08684 503 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 INSRRP14616 1297 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 SLC26A2P50443 739 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 NLRP5P59047 1200 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 SETQ01105 290 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 SSRP1Q08945 709 aaKnown RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 ITGB3BPQ13352 177 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 PKN1Q16512 942 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 TJAP1Q5JTD0 557 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 RUFY4Q6ZNE9 571 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 DNAJB3Q8WWF6 145 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 ATXN2LQ8WWM7 1075 aaKnown RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 TGS1Q96RS0 853 aaKnown RBP15.54■□□□□ 0.08
TCOF1-215ENST00000515516 TM6SF1Q9BZW5 370 aa15.54■□□□□ 0.08
TCOF1-215ENST00000515516 TANC1Q9C0D5 1861 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 LCHNA4D1U4 455 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 MBLAC1A4D2B0 266 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 FAM86B1E9PN63 330 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 M0QZ92 97 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 IPO5O00410 1097 aaKnown RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 PPFIA3O75145 1194 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 FAM86B2P0C5J1 330 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 POU3F3P20264 500 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 EVCP57679 992 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 IER5Q5VY09 327 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 ERICH6BQ5W0A0 696 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 MIS18BP1Q6P0N0 1132 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 ZNF274Q96GC6 653 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 YME1L1Q96TA2 773 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 PCYT2Q99447 389 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 ZNF577Q9BSK1 485 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 FAM49AQ9H0Q0 323 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 NCOA5Q9HCD5 579 aaKnown RBP15.53■□□□□ 0.08
TCOF1-215ENST00000515516 PRDM6Q9NQX0 595 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 MTCH2Q9Y6C9 303 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 SCN5AQ14524 2016 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 MYH7BA7E2Y1 1941 aa15.53■□□□□ 0.08
TCOF1-215ENST00000515516 EPOPA6NHQ4 379 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 ARHGEF15O94989 841 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 UPP2O95045 317 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 ATG7O95352 703 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 CHRNA1P02708 482 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 GHRP10912 638 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 MRPS5P82675 430 aaKnown RBP15.52■□□□□ 0.08
TCOF1-215ENST00000515516 GRB10Q13322 594 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
TCOF1-215ENST00000515516 PLCB4Q15147 1175 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 NTRK3Q16288 839 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 ZNF302Q9NR11 478 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 SH3GLB2Q9NR46 395 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 VPS54Q9P1Q0 977 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 MTUS1Q9ULD2 1270 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 CDY2AQ9Y6F7 541 aa15.52■□□□□ 0.08
TCOF1-215ENST00000515516 LINC01553A4QN01 128 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 HBP1O60381 514 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 ERVK-21P61565 698 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 MRPS6P82932 125 aaKnown RBP15.51■□□□□ 0.07
TCOF1-215ENST00000515516 PRR16Q569H4 304 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 PDXDC2PQ6P474 469 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 ABHD15Q6UXT9 468 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 CKAP2LQ8IYA6 745 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 NME8Q8N427 588 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 TOP1MTQ969P6 601 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 ASB2Q96Q27 587 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 C22orf23Q9BZE7 217 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 UPF3BQ9BZI7 483 aaKnown RBP15.51■□□□□ 0.07
TCOF1-215ENST00000515516 PCDHA2Q9Y5H9 948 aa15.51■□□□□ 0.07
TCOF1-215ENST00000515516 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 EIF5BO60841 1220 aaKnown RBP15.5■□□□□ 0.07
TCOF1-215ENST00000515516 DEXIO95424 95 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 CCNE2O96020 404 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 PSAPP07602 524 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 KRT76Q01546 638 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 MGAT3Q09327 533 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 STK3Q13188 491 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 LPIN1Q14693 890 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 AAK1Q2M2I8 961 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 ZNF746Q6NUN9 644 aaPredicted RBP15.5■□□□□ 0.07
TCOF1-215ENST00000515516 SWSAP1Q6NVH7 229 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 TSHZ1Q6ZSZ6 1077 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 RASGRP4Q8TDF6 673 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 ATP8B4Q8TF62 1192 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 CRYGNQ8WXF5 182 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 SAMD11Q96NU1 681 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 UIMC1Q96RL1 719 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 LARP6Q9BRS8 491 aaKnown RBP15.5■□□□□ 0.07
TCOF1-215ENST00000515516 LMCD1Q9NZU5 365 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 SAMM50Q9Y512 469 aa15.5■□□□□ 0.07
TCOF1-215ENST00000515516 IGKV6D-21A0A0A0MT36 114 aa15.49■□□□□ 0.07
TCOF1-215ENST00000515516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms