RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 FAM83BQ5T0W9 1011 aa14.25□□□□□ -0.13
TCOF1-213ENST00000514442 IL25Q9H293 177 aa14.25□□□□□ -0.13
TCOF1-213ENST00000514442 PCIF1Q9H4Z3 704 aa14.25□□□□□ -0.13
TCOF1-213ENST00000514442 ANKZF1Q9H8Y5 726 aa14.25□□□□□ -0.13
TCOF1-213ENST00000514442 NHEJ1Q9H9Q4 299 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-213ENST00000514442 CEMIPQ8WUJ3 1361 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 UTYO14607 1347 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 UBN2Q6ZU65 1347 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 M0QZ92 97 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 KRIT1O00522 736 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 CXCR5P32302 372 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 SUPT20HL1Q3ZLR7 823 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 RASGRP2Q7LDG7 609 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 ARHGAP24Q8N264 748 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
TCOF1-213ENST00000514442 STX2P32856 288 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 MDH1P40925 334 aaKnown RBP14.24□□□□□ -0.13
TCOF1-213ENST00000514442 CTTNQ14247 550 aaKnown RBP14.24□□□□□ -0.13
TCOF1-213ENST00000514442 PFKFB3Q16875 520 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-213ENST00000514442 EXOC3L4Q17RC7 722 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 WDR93Q6P2C0 686 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 TRIM65Q6PJ69 517 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 RETREG2Q8NC44 543 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L15C9J2P7 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L10C9JJH3 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L13C9JLJ4 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L11C9JVI0 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L18D6R9N7 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L22D6RA61 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L17D6RBQ6 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L19D6RCP7 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L20D6RJB6 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 MOCS3O95396 460 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 ARL1P40616 181 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-213ENST00000514442 SESN3P58005 492 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L24Q0WX57 530 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 USP17L6PQ6QN14 398 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 SYCE1Q8N0S2 351 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 ANKRD42Q8N9B4 389 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 PHLDB3Q6NSJ2 640 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 OSBPL9Q96SU4 736 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 MMS19Q96T76 1030 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 C1orf112Q9NSG2 853 aa14.24□□□□□ -0.13
TCOF1-213ENST00000514442 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 CCDC105Q8IYK2 499 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 DHTKD1Q96HY7 919 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 FAM167BQ9BTA0 163 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 VCPKMTQ9H867 229 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 METTL14Q9HCE5 456 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 POTEMA6NI47 508 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 ATP1A1P05023 1023 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 MRPS25P82663 173 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 ALX1Q15699 326 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 ADAT2Q7Z6V5 191 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 NOA1Q8NC60 698 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PLA2G4BP0C869 781 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PAX7P23759 505 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 LSP1P33241 339 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PSMD2Q13200 908 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 KRT31Q15323 416 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 FAM114A2Q9NRY5 505 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 TXNDC16Q9P2K2 825 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PARP2Q9UGN5 583 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 RWDD2AQ9UIY3 292 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 RAB21Q9UL25 225 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 KIF28PB7ZC32 967 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 DAPK3O43293 454 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 EEF1GP26641 437 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 CLUL1Q15846 466 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 PRR5LQ6MZQ0 368 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 VPS52Q8N1B4 723 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 NSUN4Q96CB9 384 aaKnown RBP14.23□□□□□ -0.13
TCOF1-213ENST00000514442 DPH5Q9H2P9 285 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 KIF9Q9HAQ2 790 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 DISC1Q9NRI5 854 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
TCOF1-213ENST00000514442 CSF1RP07333 972 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
TCOF1-213ENST00000514442 CUL4BQ13620 913 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 RASA3Q14644 834 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 CYB5D1Q6P9G0 228 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 DPP9Q86TI2 863 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 WDR11Q9BZH6 1224 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 STK17AQ9UEE5 414 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 YARSP54577 528 aaKnown RBP14.22□□□□□ -0.13
TCOF1-213ENST00000514442 MYL7Q01449 175 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 CEP170P1Q96L14 293 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 KCNG1Q9UIX4 513 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 TAF6LQ9Y6J9 622 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 TECPR2O15040 1411 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 ITSN1Q15811 1721 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
TCOF1-213ENST00000514442 A0A0G2JLW4 131 aa14.22□□□□□ -0.13
TCOF1-213ENST00000514442 TEX33O43247 280 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms