RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 PYM1Q9BRP8 204 aaKnown RBP11.4□□□□□ -0.58
NEDD9-214ENST00000513989 SENP6Q9GZR1 1112 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-214ENST00000513989 CCDC39Q9UFE4 941 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
NEDD9-214ENST00000513989 GNEQ9Y223 722 aaKnown RBP11.4□□□□□ -0.58
NEDD9-214ENST00000513989 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 LRRC37A2A6NM11 1700 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 DNM1LO00429 736 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 BACH1O14867 736 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 SORBS3O60504 671 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 P4HBP07237 508 aaKnown RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 PTMSP20962 102 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 CMA1P23946 247 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 SP4Q02446 784 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 ARHGAP1Q07960 439 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 GJC2Q5T442 439 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 IGSF22Q8N9C0 903 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 PCSK9Q8NBP7 692 aaKnown RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 AFG1LQ8WV93 481 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 GLG1Q92896 1179 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 GJA10Q969M2 543 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 CALML4Q96GE6 196 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 UNC45AQ9H3U1 944 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 SMARCAD1Q9H4L7 1026 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 XPNPEP3Q9NQH7 507 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-214ENST00000513989 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 MYH6P13533 1939 aa11.39□□□□□ -0.59
NEDD9-214ENST00000513989 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 CHD9Q3L8U1 2897 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 A0A1W2PQ27 194 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 A0A1W2PQ64 194 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 A0A1W2PQD8 194 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 A6NJR5 290 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ATG7O95352 703 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 C6orf222P0C671 652 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 MUTP22033 750 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 CCT6AP40227 531 aaKnown RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 QARSP47897 775 aaKnown RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ATN1P54259 1190 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 GJA9P57773 515 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 IL17AQ16552 155 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 SWSAP1Q6NVH7 229 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ABHD15Q6UXT9 468 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 OTUD6AQ7L8S5 288 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 TPH2Q8IWU9 490 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 TMEM87AQ8NBN3 555 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 COPS5Q92905 334 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 CCDC34Q96HJ3 373 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 GPR20Q99678 358 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 EIF2AK1Q9BQI3 630 aaKnown RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 POLR3CQ9BUI4 534 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 NT5C3AQ9H0P0 336 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ZSWIM4Q9H7M6 989 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 GDPD2Q9HCC8 539 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 NRBP2Q9NSY0 501 aa11.38□□□□□ -0.59
NEDD9-214ENST00000513989 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-214ENST00000513989 CCNE2O96020 404 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 SUPT20HL2P0C7V6 817 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 RPA1P27694 616 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 TCF7P36402 384 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 SLC26A2P50443 739 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 STAT5BP51692 787 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 PSMC5P62195 406 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 UBE2HP62256 183 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 SNX17Q15036 470 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 HSDL1Q3SXM5 330 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 UTP14CQ5TAP6 766 aaKnown RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 B3GNT9Q6UX72 402 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 CCDC73Q6ZRK6 1079 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 CABP7Q86V35 215 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 CKAP2LQ8IYA6 745 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 CLIC6Q96NY7 704 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 NACC1Q96RE7 527 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 UPF3AQ9H1J1 476 aaKnown RBP11.37□□□□□ -0.59
NEDD9-214ENST00000513989 ZNF302Q9NR11 478 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 DNM3Q9UQ16 869 aa11.37□□□□□ -0.59
NEDD9-214ENST00000513989 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 GBF1Q92538 1859 aa11.36□□□□□ -0.59
NEDD9-214ENST00000513989 GSTTP1A0A1W2PQM5 241 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms