RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 CELF2O95319 508 aaKnown RBP14.28□□□□□ -0.12
PVT1-203ENST00000513868 SLC25A27O95847 323 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 ITGBL1O95965 494 aaPredicted RBP14.28□□□□□ -0.12
PVT1-203ENST00000513868 P4HBP07237 508 aaKnown RBP14.28□□□□□ -0.12
PVT1-203ENST00000513868 EDNRBP24530 442 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 ALDH5A1P51649 535 aaPredicted RBP14.28□□□□□ -0.12
PVT1-203ENST00000513868 KRT31Q15323 416 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 CST9Q5W186 159 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 SENP7Q9BQF6 1050 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
PVT1-203ENST00000513868 THAP9Q9H5L6 903 aa14.28□□□□□ -0.12
PVT1-203ENST00000513868 BICDL2A1A5D9 508 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 KCNJ18B7U540 433 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 TEX33O43247 280 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 LYPLA2O95372 231 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 KRT18P05783 430 aaKnown RBP14.27□□□□□ -0.12
PVT1-203ENST00000513868 RSPH10BP0C881 870 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 CYP2C8P10632 490 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 KRT76Q01546 638 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 KCNJ12Q14500 433 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.12
PVT1-203ENST00000513868 LRRC8AQ8IWT6 810 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 BRI3BPQ8WY22 251 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 TRIM47Q96LD4 638 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 FGD4Q96M96 766 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.12
PVT1-203ENST00000513868 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.12
PVT1-203ENST00000513868 NFASCO94856 1347 aa14.27□□□□□ -0.13
PVT1-203ENST00000513868 DNAJC25-GNG10A0A024R161 153 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 ZNF500O60304 480 aaPredicted RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 CETPP11597 493 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 MSNP26038 577 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 ICAM3P32942 547 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 PBX1P40424 430 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 GTF2A2P52657 109 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SP2Q02086 613 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 STXBP2Q15833 593 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 UGCGQ16739 394 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SPRYD7Q5W111 196 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 FOXR2Q6PJQ5 311 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SCFD1Q8WVM8 642 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 POLD4Q9HCU8 107 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 PYCARDQ9ULZ3 195 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SLC45A1Q9Y2W3 748 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 TELO2Q9Y4R8 837 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SAMM50Q9Y512 469 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 WDR64B1ANS9 1081 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 BTBD19C9JJ37 291 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 PDHXO00330 501 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SFNP31947 248 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 COPB2P35606 906 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 JAK3P52333 1124 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 ERVK-9P63128 1117 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 ERVK-24P63145 666 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SPAG1Q07617 926 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 CCL15Q16663 113 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 SFR1Q86XK3 245 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 RDM1Q8NG50 284 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
PVT1-203ENST00000513868 CDHR1Q96JP9 859 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 PNMA3Q9UL41 463 aa14.26□□□□□ -0.13
PVT1-203ENST00000513868 SOCS7O14512 581 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
PVT1-203ENST00000513868 CASP5P51878 434 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 GSDMDP57764 484 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 LRRC63Q05C16 580 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 GNPTABQ3T906 1256 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 ANKRD23Q86SG2 305 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 SHCBP1Q8NEM2 672 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 PORCNQ9H237 461 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 KCTD10Q9H3F6 313 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 MROH8Q9H579 483 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 KCND2Q9NZV8 630 aa14.25□□□□□ -0.13
PVT1-203ENST00000513868 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
PVT1-203ENST00000513868 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
PVT1-203ENST00000513868 SFI1A8K8P3 1242 aa14.24□□□□□ -0.13
PVT1-203ENST00000513868 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
PVT1-203ENST00000513868 PGK2P07205 417 aa14.24□□□□□ -0.13
PVT1-203ENST00000513868 ZBTB48P10074 688 aaPredicted RBP14.24□□□□□ -0.13
PVT1-203ENST00000513868 GUCY2CP25092 1073 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms