RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 TBC1D22BQ9NU19 505 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 KIAA1217Q5T5P2 1943 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 MBLAC1A4D2B0 266 aaPredicted RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 SREBF1P36956 1147 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 EVCP57679 992 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 ACTR2P61160 394 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 ERVK-21P61565 698 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 MBTPS1Q14703 1052 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 GRIK4Q16099 956 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 FAM160B1Q5W0V3 765 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 CPLX2Q6PUV4 134 aaKnown RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 RUFY3Q7L099 469 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TRIM50Q86XT4 487 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 FAM177A1Q8N128 213 aaPredicted RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 USP38Q8NB14 1042 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 CYP2W1Q8TAV3 490 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 WNT8BQ93098 351 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TOP1MTQ969P6 601 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 ZNF274Q96GC6 653 aaPredicted RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TGS1Q96RS0 853 aaKnown RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 ANO3Q9BYT9 981 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 AGXT2Q9BYV1 514 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 C22orf23Q9BZE7 217 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TM6SF1Q9BZW5 370 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 CERS4Q9HA82 394 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 ZSWIM6Q9HCJ5 1215 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 AGO4Q9HCK5 861 aaKnown RBP8.31□□□□□ -1.08
HTT-212ENST00000513639 SH3GLB2Q9NR46 395 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 PKD2L1Q9P0L9 805 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 THEGQ9P2T0 379 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TUBE1Q9UJT0 475 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 COG5Q9UP83 839 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 MTCH2Q9Y6C9 303 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 SQORQ9Y6N5 450 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
HTT-212ENST00000513639 TRIP12Q14669 1992 aaPredicted RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 POTEB3A0JP26 581 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 M0QZ92 97 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 IPO5O00410 1097 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 CPLX1O14810 134 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 BACH1O14867 736 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 ATG7O95352 703 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 CHRNA1P02708 482 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 CTSHP09668 335 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 ARP10275 920 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 INSRRP14616 1297 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 CPA1P15085 419 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 IFNAR1P17181 557 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 MARK3P27448 753 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 PDIA3P30101 505 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 USP11P51784 963 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 DEFB103AP81534 67 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 SKIV2LQ15477 1246 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 JAKMIP3Q5VZ66 844 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 TYW1BQ6NUM6 668 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 MIS18BP1Q6P0N0 1132 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 POTEBQ6S5H4 581 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
HTT-212ENST00000513639 PLA2G4DQ86XP0 818 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 MYOCDQ8IZQ8 938 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 REXO1Q8N1G1 1221 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 ZNF710Q8N1W2 664 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 CCDC148Q8NFR7 591 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 SAMD11Q96NU1 681 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 RNF26Q9BY78 433 aaPredicted RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 IFIH1Q9BYX4 1025 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 TCEAL9Q9UHQ7 104 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 TRPC6Q9Y210 931 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 PCDHA2Q9Y5H9 948 aa8.3□□□□□ -1.08
HTT-212ENST00000513639 SPTBN5Q9NRC6 3674 aaKnown RBP8.3□□□□□ -1.08
HTT-212ENST00000513639 IGKV6D-21A0A0A0MT36 114 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 RFXAPO00287 272 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ENPP3O14638 875 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 HBP1O60381 514 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 UPP2O95045 317 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 CIITAP33076 1130 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 IGBP1P78318 339 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 HTRA4P83105 476 aaPredicted RBP8.29□□□□□ -1.08
HTT-212ENST00000513639 SETQ01105 290 aaPredicted RBP8.29□□□□□ -1.08
HTT-212ENST00000513639 ITGB3BPQ13352 177 aaPredicted RBP8.29□□□□□ -1.08
HTT-212ENST00000513639 PKN1Q16512 942 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 PTPROQ16827 1216 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ZNF484Q5JVG2 852 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ODR4Q5SWX8 454 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 MARCH8Q5T0T0 291 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 GALNT17Q6IS24 598 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ZNF746Q6NUN9 644 aaPredicted RBP8.29□□□□□ -1.08
HTT-212ENST00000513639 FAM117BQ6P1L5 589 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 ABHD15Q6UXT9 468 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 SMAP1Q8IYB5 467 aaPredicted RBP8.29□□□□□ -1.08
HTT-212ENST00000513639 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
HTT-212ENST00000513639 DNAJB3Q8WWF6 145 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms