RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
PTPN20-225ENST00000511769 USP28Q96RU2 1077 aa11.21□□□□□ -0.61
PTPN20-225ENST00000511769 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
PTPN20-225ENST00000511769 RTEL1Q9NZ71 1219 aa11.21□□□□□ -0.61
PTPN20-225ENST00000511769 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.62
PTPN20-225ENST00000511769 EPG5Q9HCE0 2579 aa11.21□□□□□ -0.62
PTPN20-225ENST00000511769 DMDP11532 3685 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 SPDYE16A6NNV3 312 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 M0R2N6 131 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 ZNF865P0CJ78 1059 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 ALAS1P13196 640 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 ERCC3P19447 782 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 ATP2B1P20020 1258 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 NBR1Q14596 966 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 NONOQ15233 471 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 FRMD5Q7Z6J6 570 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 DEFB128Q7Z7B8 93 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 MCF2L2Q86YR7 1114 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 PHOSPHO2Q8TCD6 241 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 LEO1Q8WVC0 666 aaPredicted RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 TNFRSF25Q93038 417 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 AGBL1Q96MI9 1066 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 NOC4LQ9BVI4 516 aaKnown RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 SUGCTQ9HAC7 445 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 RAVER2Q9HCJ3 691 aaKnown RBP11.2□□□□□ -0.62
PTPN20-225ENST00000511769 POLR3EQ9NVU0 708 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 ADAMTS5Q9UNA0 930 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 TRIOO75962 3097 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 DNAH14Q0VDD8 3507 aa11.2□□□□□ -0.62
PTPN20-225ENST00000511769 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 GCOM1H8Y6P7 765 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-225ENST00000511769 YEATS4O95619 227 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 BMP15O95972 392 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 CFBP00751 764 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 FOSP01100 380 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-225ENST00000511769 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
PTPN20-225ENST00000511769 POLR2MP0CAP2 368 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 ACTN1P12814 892 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 ZXDAP98168 799 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 PLS1Q14651 629 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 PUM1Q14671 1186 aaKnown RBP eCLIP11.19□□□□□ -0.62
PTPN20-225ENST00000511769 TTC38Q5R3I4 469 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 LBX2Q6XYB7 198 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 MB21D1Q8N884 522 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 PCSK9Q8NBP7 692 aaKnown RBP11.19□□□□□ -0.62
PTPN20-225ENST00000511769 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 EHMT1Q9H9B1 1298 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 LMBRD1Q9NUN5 540 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 SMCHD1A6NHR9 2005 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 BRWD1Q9NSI6 2320 aa11.19□□□□□ -0.62
PTPN20-225ENST00000511769 SPTLC2O15270 562 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 PFKMP08237 780 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 HOXB3P14651 431 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 STAT3P40763 770 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 ME1P48163 572 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 NASPP49321 788 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 CLK2P49760 499 aaKnown RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 TOB1P50616 345 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 UBE2SQ16763 222 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 INF2Q27J81 1249 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 EARS2Q5JPH6 523 aaKnown RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 TRERF1Q96PN7 1200 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 NAP1L4Q99733 375 aaKnown RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 TINF2Q9BSI4 451 aa11.18□□□□□ -0.62
PTPN20-225ENST00000511769 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
PTPN20-225ENST00000511769 MYH15Q9Y2K3 1946 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 PIK3CDO00329 1044 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 MEIS2O14770 477 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 ATP2A1O14983 1001 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 ADAMTS3O15072 1205 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 PPP6R2O75170 966 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 CST5P28325 142 aaPredicted RBP11.17□□□□□ -0.62
PTPN20-225ENST00000511769 UBE2HP62256 183 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 ZNF174Q15697 407 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 CLUL1Q15846 466 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 TPRNQ4KMQ1 711 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 NEK8Q86SG6 692 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 TBCKQ8TEA7 893 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
PTPN20-225ENST00000511769 TEX13BQ9BXU2 312 aa11.17□□□□□ -0.62
PTPN20-225ENST00000511769 FTOQ9C0B1 505 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms