RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 PRRC2BQ5JSZ5 2229 aaKnown RBP17.48■□□□□ 0.39
COL1A1-213ENST00000511732 CCDC196A0A1B0GTZ2 297 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
COL1A1-213ENST00000511732 FAM86B1E9PN63 330 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
COL1A1-213ENST00000511732 AMHP03971 560 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 FAM86B2P0C5J1 330 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 INSRRP14616 1297 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 ACTR2P61160 394 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
COL1A1-213ENST00000511732 DNAJB3Q8WWF6 145 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 ASB2Q96Q27 587 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 ZMYND12Q9H0C1 365 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 SUGCTQ9HAC7 445 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 TUBE1Q9UJT0 475 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
COL1A1-213ENST00000511732 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-213ENST00000511732 REC8O95072 547 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 ATG7O95352 703 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 CCNE2O96020 404 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 ERVK-21P61565 698 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 IGBP1P78318 339 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 PLCB4Q15147 1175 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 TAF2Q6P1X5 1199 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 GDPD5Q8WTR4 605 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 TOP1MTQ969P6 601 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 SDF4Q9BRK5 362 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 IFIH1Q9BYX4 1025 aaKnown RBP17.46■□□□□ 0.39
COL1A1-213ENST00000511732 GLT8D2Q9H1C3 349 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 INSL6Q9Y581 213 aa17.46■□□□□ 0.39
COL1A1-213ENST00000511732 IGLV3-22A0A075B6J6 115 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 GHRP10912 638 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 PSMA5P28066 241 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 ZNF76P36508 570 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 EVCP57679 992 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 TFF2Q03403 129 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 SP7Q8TDD2 431 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 TRAPPC12Q8WVT3 735 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 UIMC1Q96RL1 719 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 TGS1Q96RS0 853 aaKnown RBP17.45■□□□□ 0.38
COL1A1-213ENST00000511732 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 XIRP2A4UGR9 3374 aa17.45■□□□□ 0.38
COL1A1-213ENST00000511732 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 DHX15O43143 795 aaKnown RBP17.44■□□□□ 0.38
COL1A1-213ENST00000511732 UPP2O95045 317 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 CYP3A4P08684 503 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 STAT5BP51692 787 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 TOB2Q14106 344 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-213ENST00000511732 LPIN1Q14693 890 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 PLPPR4Q7Z2D5 763 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 RASGRP4Q8TDF6 673 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 APBB2Q92870 758 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 AZI2Q9H6S1 392 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 NCOA5Q9HCD5 579 aaKnown RBP17.44■□□□□ 0.38
COL1A1-213ENST00000511732 ZSWIM6Q9HCJ5 1215 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 CDY2AQ9Y6F7 541 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 LOXHD1Q8IVV2 1947 aa17.44■□□□□ 0.38
COL1A1-213ENST00000511732 TRANK1O15050 2925 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 TCF20Q9UGU0 1960 aaKnown RBP17.43■□□□□ 0.38
COL1A1-213ENST00000511732 RRN3P2A6NIE6 340 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 EDIL3O43854 480 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 SKIV2LQ15477 1246 aaKnown RBP17.43■□□□□ 0.38
COL1A1-213ENST00000511732 FBXO47Q5MNV8 452 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 RNF26Q9BY78 433 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-213ENST00000511732 FAM49AQ9H0Q0 323 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-213ENST00000511732 TSPYL2Q9H2G4 693 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-213ENST00000511732 C6orf50Q9HD87 102 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 TRPC6Q9Y210 931 aa17.43■□□□□ 0.38
COL1A1-213ENST00000511732 NLRC5Q86WI3 1866 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 CUL9Q8IWT3 2517 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 MUC3AQ02505 3323 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
COL1A1-213ENST00000511732 IFNAR1P17181 557 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 TMEM62Q0P6H9 643 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 CCDC60Q8IWA6 550 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-213ENST00000511732 REXO1Q8N1G1 1221 aaKnown RBP17.42■□□□□ 0.38
COL1A1-213ENST00000511732 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
COL1A1-213ENST00000511732 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 AGO3Q9H9G7 860 aaKnown RBP17.42■□□□□ 0.38
COL1A1-213ENST00000511732 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 COL4A6Q14031 1691 aa17.42■□□□□ 0.38
COL1A1-213ENST00000511732 POTEB3A0JP26 581 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 IPO5O00410 1097 aaKnown RBP17.41■□□□□ 0.38
COL1A1-213ENST00000511732 BMP1P13497 986 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 ATP4AP20648 1035 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 GNA11P29992 359 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 KCNQ1P51787 676 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 MRPS6P82932 125 aaKnown RBP17.41■□□□□ 0.38
COL1A1-213ENST00000511732 POTEBQ6S5H4 581 aa17.41■□□□□ 0.38
COL1A1-213ENST00000511732 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms