RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SGPP1Q9BX95 441 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 PRO3102Q9H379 93 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 NOL6Q9H6R4 1146 aaKnown RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 SRP68Q9UHB9 627 aaKnown RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 SF3B6Q9Y3B4 125 aaKnown RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 TAF6LQ9Y6J9 622 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 TTC28Q96AY4 2481 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 FGF10O15520 208 aaPredicted RBP7.68□□□□□ -1.18
GYPB-212ENST00000511198 PRKCAP17252 672 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 CASP7P55210 303 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 LINC00310P59036 64 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 KIF23Q02241 960 aaPredicted RBP7.68□□□□□ -1.18
GYPB-212ENST00000511198 FBXO46Q6PJ61 603 aaPredicted RBP7.68□□□□□ -1.18
GYPB-212ENST00000511198 ZSCAN18Q8TBC5 510 aaPredicted RBP7.68□□□□□ -1.18
GYPB-212ENST00000511198 WHRNQ9P202 907 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 STXBP5LQ9Y2K9 1186 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 DIS3Q9Y2L1 958 aaKnown RBP7.68□□□□□ -1.18
GYPB-212ENST00000511198 TTC21BQ7Z4L5 1316 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 ITGB4P16144 1822 aa7.68□□□□□ -1.18
GYPB-212ENST00000511198 CELF2O95319 508 aaKnown RBP7.67□□□□□ -1.18
GYPB-212ENST00000511198 IFNGR1P15260 489 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 NOP2P46087 812 aaKnown RBP7.67□□□□□ -1.18
GYPB-212ENST00000511198 CYP4F8P98187 520 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 LAPTM5Q13571 262 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 FBLN7Q53RD9 439 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 HEATR6Q6AI08 1181 aaKnown RBP7.67□□□□□ -1.18
GYPB-212ENST00000511198 C2CD5Q86YS7 1000 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 CPLX3Q8WVH0 158 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 ZDHHC15Q96MV8 337 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 MCMBPQ9BTE3 642 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 CCSER2Q9H7U1 834 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 IMPACTQ9P2X3 320 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 SUSD2Q9UGT4 822 aa7.67□□□□□ -1.18
GYPB-212ENST00000511198 MBD1Q9UIS9 605 aaPredicted RBP7.67□□□□□ -1.18
GYPB-212ENST00000511198 EYSQ5T1H1 3165 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 RPS6KA4O75676 772 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 EPHX1P07099 455 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 ATF4P18848 351 aaPredicted RBP7.66□□□□□ -1.18
GYPB-212ENST00000511198 VIPR1P32241 457 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 SRSF3P84103 164 aaKnown RBP7.66□□□□□ -1.18
GYPB-212ENST00000511198 POU4F1Q01851 419 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 MVKQ03426 396 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 PPP2R5DQ14738 602 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 HLA-DQA1Q5Y7H0 255 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 SIAH1Q8IUQ4 282 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 NAT16Q8N8M0 369 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 NUP43Q8NFH3 380 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 ADCY4Q8NFM4 1077 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 LTV1Q96GA3 475 aaPredicted RBP7.66□□□□□ -1.18
GYPB-212ENST00000511198 FGD4Q96M96 766 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 TAOK3Q9H2K8 898 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 KLHL14Q9P2G3 628 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 ASAP1Q9ULH1 1129 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 STRIP2Q9ULQ0 834 aa7.66□□□□□ -1.18
GYPB-212ENST00000511198 LAMA2P24043 3122 aaKnown RBP7.66□□□□□ -1.18
GYPB-212ENST00000511198 FAM208AQ9UK61 1670 aaKnown RBP7.66□□□□□ -1.18
GYPB-212ENST00000511198 CD3EP07766 207 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 MSL3P1P0C860 447 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 CYP2R1Q6VVX0 501 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 ZNF513Q8N8E2 541 aaPredicted RBP7.65□□□□□ -1.18
GYPB-212ENST00000511198 PTCHD1Q96NR3 888 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 TNFRSF12AQ9NP84 129 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 HDAC9Q9UKV0 1011 aa7.65□□□□□ -1.18
GYPB-212ENST00000511198 KIAA0100Q14667 2235 aaKnown RBP7.64□□□□□ -1.19
GYPB-212ENST00000511198 LTN1O94822 1766 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 RBBP6Q7Z6E9 1792 aaKnown RBP7.64□□□□□ -1.19
GYPB-212ENST00000511198 H0YIN7 160 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 MPOP05164 745 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 ZSCAN22P10073 491 aaPredicted RBP7.64□□□□□ -1.19
GYPB-212ENST00000511198 ARL4AP40617 200 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 Q7L0L9 218 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 ARHGEF39Q8N4T4 335 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 GBP3Q9H0R5 595 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 CNTD2Q9H8S5 307 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 AKAP11Q9UKA4 1901 aa7.64□□□□□ -1.19
GYPB-212ENST00000511198 AFDNP55196 1824 aaKnown RBP7.64□□□□□ -1.19
GYPB-212ENST00000511198 AURKAO14965 403 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 VAMP4O75379 141 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 EPS15P42566 896 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 RCSD1Q6JBY9 416 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 KIAA1211LQ6NV74 962 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 ADAT2Q7Z6V5 191 aaKnown RBP7.63□□□□□ -1.19
GYPB-212ENST00000511198 DEFB123Q8N688 67 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 RCC1LQ96I51 464 aaKnown RBP7.63□□□□□ -1.19
GYPB-212ENST00000511198 SIRT5Q9NXA8 310 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 CGGBP1Q9UFW8 167 aaPredicted RBP7.63□□□□□ -1.19
GYPB-212ENST00000511198 RGPD2P0DJD1 1756 aa7.63□□□□□ -1.19
GYPB-212ENST00000511198 CARMIL3Q8ND23 1372 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 USP42Q9H9J4 1324 aaKnown RBP7.62□□□□□ -1.19
GYPB-212ENST00000511198 ABLIM1O14639 778 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 CYP27B1O15528 508 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 NUAK1O60285 661 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 PPM1BO75688 479 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 ERCC5P28715 1186 aaPredicted RBP7.62□□□□□ -1.19
GYPB-212ENST00000511198 EPHB3P54753 998 aa7.62□□□□□ -1.19
GYPB-212ENST00000511198 HUNKP57058 714 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms