RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 C1orf210Q8IVY1 113 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 SYTL5Q8TDW5 730 aaPredicted RBP12.67□□□□□ -0.38
SNF8-207ENST00000509995 CLUAP1Q96AJ1 413 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 TAAR1Q96RJ0 339 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 AAASQ9NRG9 546 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 TMEM260Q9NX78 707 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 DBR1Q9UK59 544 aaKnown RBP12.67□□□□□ -0.38
SNF8-207ENST00000509995 ANGPTL2Q9UKU9 493 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 HCFC2Q9Y5Z7 792 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 FRMPD2Q68DX3 1309 aaPredicted RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 KRBA1A5PL33 1030 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 SPTLC1O15269 473 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 NMT2O60551 498 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 GGPS1O95749 300 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 STAG3L1P0CL83 205 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 RFX1P22670 979 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 ADAM17P78536 824 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 SPECC1Q5M775 1068 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 FBXO47Q5MNV8 452 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 LMBR1Q8WVP7 490 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 SECISBP2LQ93073 1101 aaKnown RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 TCF25Q9BQ70 676 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 ENTPD7Q9NQZ7 604 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 DLGAP2Q9P1A6 1054 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 USP18Q9UMW8 372 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 LZTS1Q9Y250 596 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 GCN1Q92616 2671 aaKnown RBP12.66□□□□□ -0.38
SNF8-207ENST00000509995 PATJQ8NI35 1801 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 MIA3Q5JRA6 1907 aa12.66□□□□□ -0.38
SNF8-207ENST00000509995 DOCK5Q9H7D0 1870 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 MYH6P13533 1939 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 DCNP07585 359 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 EIF2AK2P19525 551 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 ARHGAP4P98171 946 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 USH1GQ495M9 461 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 RTN4RL1Q86UN2 441 aaPredicted RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 FTHL17Q9BXU8 183 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 MAF1Q9H063 256 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 TBC1D17Q9HA65 648 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 WNT16Q9UBV4 365 aa12.65□□□□□ -0.38
SNF8-207ENST00000509995 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 ASH1LQ9NR48 2969 aaKnown RBP12.65□□□□□ -0.38
SNF8-207ENST00000509995 C2orf16Q68DN1 1984 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 SCG2P13521 617 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 ATP5JP18859 108 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 TGM1P22735 817 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 CD52P31358 61 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 NOVP48745 357 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 RARS2Q5T160 578 aaKnown RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 XRRA1Q6P2D8 792 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 KCNV1Q6PIU1 500 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 COLGALT1Q8NBJ5 622 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 ACSF2Q96CM8 615 aaPredicted RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 BORCS6Q96GS4 357 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 AGO3Q9H9G7 860 aaKnown RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 KCNK12Q9HB15 430 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
SNF8-207ENST00000509995 LOC400499M0QZD8 3231 aa12.64□□□□□ -0.39
SNF8-207ENST00000509995 POTEMA6NI47 508 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 TSPY2A6NKD2 308 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 SLC30A4O14863 429 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 SLC3A2P08195 630 aaKnown RBP12.63□□□□□ -0.39
SNF8-207ENST00000509995 NR3C2P08235 984 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 CFHP08603 1231 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 SP2Q02086 613 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 ATAT1Q5SQI0 421 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 RUFY4Q6ZNE9 571 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 MAML2Q8IZL2 1156 aaPredicted RBP12.63□□□□□ -0.39
SNF8-207ENST00000509995 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
SNF8-207ENST00000509995 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 IGF2RP11717 2491 aa12.63□□□□□ -0.39
SNF8-207ENST00000509995 GPAA1O43292 621 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 APPP05067 770 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 GNAT2P19087 354 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PMLP29590 882 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 SHC2P98077 582 aa12.62□□□□□ -0.39
SNF8-207ENST00000509995 PLCB3Q01970 1234 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms