RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GALNT17Q6IS24 598 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 PLPPR4Q7Z2D5 763 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 ZBED2Q9BTP6 218 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 TUBE1Q9UJT0 475 aa21.19■□□□□ 0.98
UBE3D-207ENST00000509102 DDX39AO00148 427 aaKnown RBP21.18■□□□□ 0.98
UBE3D-207ENST00000509102 BACH1O14867 736 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 CTSHP09668 335 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 ITGB3BPQ13352 177 aaPredicted RBP21.18■□□□□ 0.98
UBE3D-207ENST00000509102 MIS18BP1Q6P0N0 1132 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 HERC6Q8IVU3 1022 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 MAFAQ8NHW3 353 aaPredicted RBP21.18■□□□□ 0.98
UBE3D-207ENST00000509102 RASGRP4Q8TDF6 673 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 PCDHA4Q9UN74 947 aa21.18■□□□□ 0.98
UBE3D-207ENST00000509102 YBX2Q9Y2T7 364 aaKnown RBP21.18■□□□□ 0.98
UBE3D-207ENST00000509102 WDR5P61964 334 aaKnown RBP21.17■□□□□ 0.98
UBE3D-207ENST00000509102 ADAM17P78536 824 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 GPNMBQ14956 572 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 PRR16Q569H4 304 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 TRAF7Q6Q0C0 670 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 CRYGNQ8WXF5 182 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 SEPT8Q92599 483 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
UBE3D-207ENST00000509102 IGLV3-22A0A075B6J6 115 aa21.16■□□□□ 0.98
UBE3D-207ENST00000509102 TLL1O43897 1013 aa21.16■□□□□ 0.98
UBE3D-207ENST00000509102 CIITAP33076 1130 aa21.16■□□□□ 0.98
UBE3D-207ENST00000509102 USP11P51784 963 aa21.16■□□□□ 0.98
UBE3D-207ENST00000509102 IGBP1P78318 339 aa21.16■□□□□ 0.98
UBE3D-207ENST00000509102 PFKFB2O60825 505 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 ATG7O95352 703 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 AMHP03971 560 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 CA3P07451 260 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 INSRRP14616 1297 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 KRT76Q01546 638 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 SCRN1Q12765 414 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 MBTPS1Q14703 1052 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 ZNF746Q6NUN9 644 aaPredicted RBP21.15■□□□□ 0.98
UBE3D-207ENST00000509102 RPAINQ86UA6 219 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 SMAP1Q8IYB5 467 aaPredicted RBP21.15■□□□□ 0.98
UBE3D-207ENST00000509102 BLIDQ8IZY5 108 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 WASF1Q92558 559 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 APBB2Q92870 758 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 PRDM12Q9H4Q4 367 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 ZNF302Q9NR11 478 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 TPCN1Q9ULQ1 816 aa21.15■□□□□ 0.98
UBE3D-207ENST00000509102 STK36Q9NRP7 1315 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 POTEB3A0JP26 581 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 MBLAC1A4D2B0 266 aaPredicted RBP21.14■□□□□ 0.97
UBE3D-207ENST00000509102 M0QZ92 97 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 MYOGP15173 224 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 AK2P54819 239 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 PLEKHG4Q58EX7 1191 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 POTEBQ6S5H4 581 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 CKAP2LQ8IYA6 745 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 DBF4BQ8NFT6 615 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 PCYT2Q99447 389 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 SAMM50Q9Y512 469 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 TET1Q8NFU7 2136 aa21.14■□□□□ 0.97
UBE3D-207ENST00000509102 ADAMTS3O15072 1205 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 CCNE2O96020 404 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 PSAPP07602 524 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 NEK4P51957 841 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 PLCB4Q15147 1175 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 FAM26DQ5JW98 314 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 IER5Q5VY09 327 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 PDXDC2PQ6P474 469 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 ABHD15Q6UXT9 468 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 KRT25Q7Z3Z0 450 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 DAGLBQ8NCG7 672 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 TBCKQ8TEA7 893 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 GBF1Q92538 1859 aa21.13■□□□□ 0.97
UBE3D-207ENST00000509102 IGKV6D-21A0A0A0MT36 114 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 DHX15O43143 795 aaKnown RBP21.12■□□□□ 0.97
UBE3D-207ENST00000509102 HBP1O60381 514 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 NONOQ15233 471 aaKnown RBP eCLIP21.12■□□□□ 0.97
UBE3D-207ENST00000509102 RUFY4Q6ZNE9 571 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 DNAJB3Q8WWF6 145 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 IL17RAQ96F46 866 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 IFIH1Q9BYX4 1025 aaKnown RBP21.12■□□□□ 0.97
UBE3D-207ENST00000509102 PCDHA10Q9Y5I2 948 aa21.12■□□□□ 0.97
UBE3D-207ENST00000509102 CCDC194A0A1B0GVG4 234 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 WDR64B1ANS9 1081 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 GAS7O60861 476 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 GJB5O95377 273 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 IGFBP4P22692 258 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 DEFB103AP81534 67 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 MARCH8Q5T0T0 291 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 SWSAP1Q6NVH7 229 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 MYOCDQ8IZQ8 938 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 ATP8B4Q8TF62 1192 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 UIMC1Q96RL1 719 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 RIT2Q99578 217 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 RAD9AQ99638 391 aa21.11■□□□□ 0.97
UBE3D-207ENST00000509102 FAM49AQ9H0Q0 323 aaPredicted RBP21.11■□□□□ 0.97
UBE3D-207ENST00000509102 COL1A2P08123 1366 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 CCDC60Q8IWA6 550 aaPredicted RBP21.1■□□□□ 0.97
UBE3D-207ENST00000509102 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.1■□□□□ 0.97
UBE3D-207ENST00000509102 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 TEKT3Q9BXF9 490 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 BRMS1Q9HCU9 246 aa21.1■□□□□ 0.97
UBE3D-207ENST00000509102 ORC3Q9UBD5 711 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms