RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GIMAP8Q8ND71 665 aaPredicted RBP18.41■□□□□ 0.54
CXCL1-202ENST00000509101 PLVAPQ9BX97 442 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 PKD2L1Q9P0L9 805 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 PLAGL2Q9UPG8 496 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 TAF6LQ9Y6J9 622 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 FNDC1Q4ZHG4 1894 aaPredicted RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 MEIS2O14770 477 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 KCNA2P16389 499 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 DNAJB1P25685 340 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 IGBP1P78318 339 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 MRPS6P82932 125 aaKnown RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 ADAM15Q13444 863 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 SART3Q15020 963 aaKnown RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 PAN2Q504Q3 1202 aaKnown RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 XRRA1Q6P2D8 792 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 CATIPQ7Z7H3 387 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 GLG1Q92896 1179 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 ZBTB10Q96DT7 871 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 FAM49AQ9H0Q0 323 aaPredicted RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 AGO3Q9H9G7 860 aaKnown RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 ERAP1Q9NZ08 941 aa18.4■□□□□ 0.54
CXCL1-202ENST00000509101 U3KPZ7 1027 aaPredicted RBP18.4■□□□□ 0.54
CXCL1-202ENST00000509101 GSTTP1A0A1W2PQM5 241 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 MBLAC1A4D2B0 266 aaPredicted RBP18.39■□□□□ 0.53
CXCL1-202ENST00000509101 ITGB1P05556 798 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 MARCH8Q5T0T0 291 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 CMTR2Q8IYT2 770 aaKnown RBP18.39■□□□□ 0.53
CXCL1-202ENST00000509101 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 P2RX5Q93086 422 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 PPP2R3CQ969Q6 453 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 GPRASP2Q96D09 838 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
CXCL1-202ENST00000509101 MSLNLQ96KJ4 702 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 MYL10Q9BUA6 226 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
CXCL1-202ENST00000509101 E7EWF7 191 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 PIK3CDO00329 1044 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 ANTXR2P58335 489 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 PTH1RQ03431 593 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 AAMPQ13685 434 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 NPAS4Q8IUM7 802 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 PRSS33Q8NF86 280 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 NCOA7Q8NI08 942 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 EDAQ92838 391 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 PHOX2BQ99453 314 aa18.38■□□□□ 0.53
CXCL1-202ENST00000509101 SEC63Q9UGP8 760 aaKnown RBP18.38■□□□□ 0.53
CXCL1-202ENST00000509101 USP34Q70CQ2 3546 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 ZDBF2Q9HCK1 2354 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 EYA4O95677 639 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 ITGB5P18084 799 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
CXCL1-202ENST00000509101 TMEM62Q0P6H9 643 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 EFHBQ8N7U6 833 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 CTCFLQ8NI51 663 aaPredicted RBP18.37■□□□□ 0.53
CXCL1-202ENST00000509101 SPPL3Q8TCT6 385 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 SMARCAD1Q9H4L7 1026 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 CLEC1BQ9P126 229 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
CXCL1-202ENST00000509101 TMEM221A6NGB7 291 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 M0R296 226 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
CXCL1-202ENST00000509101 NRIP1P48552 1158 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 GATMP50440 423 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 MTMR1Q13613 665 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 UBE2SQ16763 222 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 NAALADL2Q58DX5 795 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
CXCL1-202ENST00000509101 RTN4RL1Q86UN2 441 aaPredicted RBP18.36■□□□□ 0.53
CXCL1-202ENST00000509101 SMRP1Q8NCR6 262 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 FTHL17Q9BXU8 183 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 BARX2Q9UMQ3 279 aaPredicted RBP18.36■□□□□ 0.53
CXCL1-202ENST00000509101 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
CXCL1-202ENST00000509101 M0QZ92 97 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 PLEKHA8P1O95397 391 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 GLP2RO95838 553 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 SCG2P13521 617 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 INSRRP14616 1297 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 PAK2Q13177 524 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 IER5Q5VY09 327 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 TRIM67Q6ZTA4 783 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 MB21D2Q8IYB1 491 aaPredicted RBP18.35■□□□□ 0.53
CXCL1-202ENST00000509101 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 TRAPPC12Q8WVT3 735 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 PADI3Q9ULW8 664 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 TRPC6Q9Y210 931 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
CXCL1-202ENST00000509101 UBIAD1Q9Y5Z9 338 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 EVPLQ92817 2033 aa18.35■□□□□ 0.53
CXCL1-202ENST00000509101 IGSF9BQ9UPX0 1349 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 RRN3P2A6NIE6 340 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 DDAH1O94760 285 aa18.34■□□□□ 0.53
CXCL1-202ENST00000509101 RPLP2P05387 115 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms