RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 IGHMBP2P38935 993 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 IFNAR2P48551 515 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PEX5P50542 639 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ETF1P62495 437 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TDGQ13569 410 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 STAT4Q14765 748 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 HIF1AQ16665 826 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PIK3R6Q5UE93 754 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 INTS3Q68E01 1043 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BPHLQ86WA6 291 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 REM2Q8IYK8 340 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ZBTB10Q96DT7 871 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 C16orf45Q96MC5 204 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BAG1Q99933 345 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PHTF1Q9UMS5 762 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RGPD3A6NKT7 1758 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RGPD4Q7Z3J3 1758 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 AK9Q5TCS8 1911 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CTAGE9A4FU28 777 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ARIH2O95376 493 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 STAT3P40763 770 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ECI1P42126 302 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CEBPZQ03701 1054 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 AP3B2Q13367 1082 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BLMHQ13867 455 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 DCTN1Q14203 1278 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TAF7Q15545 349 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ATP6V0A1Q93050 837 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 GCC1Q96CN9 775 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 FERMT1Q9BQL6 677 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ADAMTS1Q9UHI8 967 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CASZ1Q86V15 1759 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TRBV23-1A0A0A0MS06 115 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 NUDT19A8MXV4 375 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BCAR3O75815 825 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RHOBTB3O94955 611 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 NF2P35240 595 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RECQLP46063 649 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CCT4P50991 539 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 APBA1Q02410 837 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PABPC4Q13310 644 aaKnown RBP eCLIP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 FAM83BQ5T0W9 1011 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 FAM102BQ5T8I3 360 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TTBK2Q6IQ55 1244 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BRINP3Q76B58 766 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 NECAB2Q7Z6G3 386 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 C2CD5Q86YS7 1000 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SLC9A9Q8IVB4 645 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RPUSD2Q8IZ73 545 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PDCD7Q8N8D1 485 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SNX29Q8TEQ0 813 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TARS2Q9BW92 718 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 APOL6Q9BWW8 343 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ASCC2Q9H1I8 757 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF287Q9HBT7 754 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SCAF8Q9UPN6 1271 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PCDHGA10Q9Y5H3 936 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MEGF6O75095 1541 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SPEF2Q9C093 1822 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 SSU72P8A0A1W2PR75 194 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC69A6NI79 296 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 SKAP2O75563 359 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 RTN3O95197 1032 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC192P0DO97 292 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 EDN3P14138 238 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 ABCB4P21439 1286 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 ATP5F1P24539 256 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 RCN1Q15293 331 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 TERF2Q15554 542 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CACTIN-AS1Q8N1I8 211 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CELF2-AS1Q8N7Q2 184 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 MAGEB6Q8N7X4 407 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 EMID1Q96A84 441 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 SAP130Q9H0E3 1048 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 GBP3Q9H0R5 595 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 KANSL2Q9H9L4 492 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 SP110Q9HB58 689 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 IL1RAPL2Q9NP60 686 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CHORDC1Q9UHD1 332 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 SH3BP1Q9Y3L3 701 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 GOLGA6L7A0A1B0GV03 622 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 K7ENM7 598 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 RTCAO00442 366 aaKnown RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 KHNYNO15037 678 aaKnown RBP4.29□□□□□ -1.72
NEDD4-209ENST00000508871 TSPAN9O75954 239 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 FLOT1O75955 427 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 GJB6O95452 261 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 CPA1P15085 419 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 GALK2Q01415 458 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 RASSF7Q02833 373 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 C1orf141Q5JVX7 400 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 NSMFQ6X4W1 530 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF653Q96CK0 615 aa4.29□□□□□ -1.72
NEDD4-209ENST00000508871 PGBD4Q96DM1 585 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms