RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
CCHCR1-227ENST00000508852 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-227ENST00000508852 NAP1L2Q9ULW6 460 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-227ENST00000508852 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-227ENST00000508852 NCOR1O75376 2440 aa15.51■□□□□ 0.07
CCHCR1-227ENST00000508852 LCHNA4D1U4 455 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 RFXAPO00287 272 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 MEIS1O00470 390 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 SCG2P13521 617 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 HSPA4P34932 840 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 CLK2P49760 499 aaKnown RBP15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 STAT5BP51692 787 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 ADCK5Q3MIX3 580 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 FAM160B1Q5W0V3 765 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 FAM117BQ6P1L5 589 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 FBXO22Q8NEZ5 403 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 FTHL17Q9BXU8 183 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 RALGAPA2Q2PPJ7 1873 aa15.5■□□□□ 0.07
CCHCR1-227ENST00000508852 NID2Q14112 1375 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 EPOPA6NHQ4 379 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 LPXNO60711 386 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 CYP3A4P08684 503 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 ACTR2P61160 394 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 SETQ01105 290 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 COL9A3Q14050 684 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 CCDC148Q8NFR7 591 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 JAKMIP1Q96N16 626 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 ZMYND12Q9H0C1 365 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 AGO4Q9HCK5 861 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 TBC1D22BQ9NU19 505 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 PKD2L1Q9P0L9 805 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 PCDHA2Q9Y5H9 948 aa15.49■□□□□ 0.07
CCHCR1-227ENST00000508852 PRPF3O43395 683 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 ARHGEF15O94989 841 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 ATG7O95352 703 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 CHRNA1P02708 482 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 BMP1P13497 986 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 INSRRP14616 1297 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 MARK3P27448 753 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 MRPS6P82932 125 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 Q6ZUG5 572 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 IL17RAQ96F46 866 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 FAM217BQ9NTX9 383 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 COL1A2P08123 1366 aa15.48■□□□□ 0.07
CCHCR1-227ENST00000508852 POTEB3A0JP26 581 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 HBP1O60381 514 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 RB1P06400 928 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 RPS6KB1P23443 525 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 CDC27P30260 824 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 MGAT3Q09327 533 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 TIGD5Q53EQ6 642 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 FBXO47Q5MNV8 452 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 MARCH8Q5T0T0 291 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 TYW1BQ6NUM6 668 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 MIS18BP1Q6P0N0 1132 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 POTEBQ6S5H4 581 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 NLRC5Q86WI3 1866 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 FAM177A1Q8N128 213 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 REXO1Q8N1G1 1221 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 GDPD5Q8WTR4 605 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 DNAJB3Q8WWF6 145 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 BRF1Q92994 677 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 MRPL38Q96DV4 380 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 RNF26Q9BY78 433 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 AGXT2Q9BYV1 514 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 SNX14Q9Y5W7 946 aa15.47■□□□□ 0.07
CCHCR1-227ENST00000508852 MYH9P35579 1960 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 SMIM35A0A1B0GVV1 85 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 H3BNC9 293 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 NCK2O43639 380 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 UPP2O95045 317 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 ARP10275 920 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 GHRP10912 638 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 ADD1P35611 737 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 IGBP1P78318 339 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 APOBRQ0VD83 1088 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 LPIN1Q14693 890 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 PLCB4Q15147 1175 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 PUS10Q3MIT2 529 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 EPC2Q52LR7 807 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 PLA2G4DQ86XP0 818 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 SMAP1Q8IYB5 467 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 C22orf23Q9BZE7 217 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 MTUS1Q9ULD2 1270 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 TELO2Q9Y4R8 837 aa15.46■□□□□ 0.07
CCHCR1-227ENST00000508852 TRPV2Q9Y5S1 764 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms