RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 MGAT3Q09327 533 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 AP3B2Q13367 1082 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 MICALL1Q8N3F8 863 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 SEPT8Q92599 483 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 ZMYND12Q9H0C1 365 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 GLT8D2Q9H1C3 349 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 REC8O95072 547 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 CCNE2O96020 404 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 CYP3A4P08684 503 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 PSMA5P28066 241 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 ERVK-21P61565 698 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 TJAP1Q5JTD0 557 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 PLPPR4Q7Z2D5 763 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 MYOCDQ8IZQ8 938 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 ATXN2LQ8WWM7 1075 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 SUGCTQ9HAC7 445 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
CDC42SE2-209ENST00000506419 NID2Q14112 1375 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 IGLV3-22A0A075B6J6 115 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 IGKV6D-21A0A0A0MT36 114 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 ESYT2A0FGR8 921 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 AMHP03971 560 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 ZNF76P36508 570 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 STAT5BP51692 787 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 IGBP1P78318 339 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 RUFY3Q7L099 469 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 TRAPPC12Q8WVT3 735 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 ASB2Q96Q27 587 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 INSL6Q9Y581 213 aa16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 PRRC2BQ5JSZ5 2229 aaKnown RBP16.41■□□□□ 0.22
CDC42SE2-209ENST00000506419 RRN3P2A6NIE6 340 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 DDX39AO00148 427 aaKnown RBP16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 GHRP10912 638 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 IFNAR1P17181 557 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 LPIN1Q14693 890 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 TAF2Q6P1X5 1199 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 RASGRP4Q8TDF6 673 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 TGS1Q96RS0 853 aaKnown RBP16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 SLC26A6Q9BXS9 759 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 THEGQ9P2T0 379 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 PTPRSQ13332 1948 aa16.4■□□□□ 0.22
CDC42SE2-209ENST00000506419 ENPP3O14638 875 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 GTPBP6O43824 516 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 UPP2O95045 317 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 ATP4AP20648 1035 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 MRPS5P82675 430 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 TFF2Q03403 129 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 FBXO47Q5MNV8 452 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 RTN4RL1Q86UN2 441 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 SP7Q8TDD2 431 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 GDPD5Q8WTR4 605 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 SYMPKQ92797 1274 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 C17orf80Q9BSJ5 609 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 IFIH1Q9BYX4 1025 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 CDY2AQ9Y6F7 541 aa16.39■□□□□ 0.21
CDC42SE2-209ENST00000506419 APBB2Q92870 758 aa16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 VPS54Q9P1Q0 977 aa16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 TRPC6Q9Y210 931 aa16.38■□□□□ 0.21
CDC42SE2-209ENST00000506419 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 IPO5O00410 1097 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 BMP1P13497 986 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 GNA11P29992 359 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 CIITAP33076 1130 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 MRPS6P82932 125 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 SWSAP1Q6NVH7 229 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 MTHFD1LQ6UB35 978 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 LENG9Q96B70 501 aa16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 ZNF274Q96GC6 653 aaPredicted RBP16.37■□□□□ 0.21
CDC42SE2-209ENST00000506419 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms